Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq3125 351 2e-94 seq5483 320 3e-85 seq5271 295 1e-77 seq2314 293 4e-77 seq38293 197 2e-48 seq4248 178 2e-42 seq65360 113 8e-23 seq5436 98.7 2e-18 seq79221 93.3 7e-17 >seq3125 Length=23882 Score = 351 bits (388), Expect = 2e-94 Identities = 248/281 (88%), Gaps = 2/281 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | |||| | |||||||||||||||||||||||||||| Sbjct 6664 TACTGAGCAGTATTACTATCGCAACGACAAGCCATCAGTAGGGTAAAACTAACCTGTCTC 6605 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||| || ||||||||||||||||||||| || Sbjct 6604 ACGACGGTCTAAACCCAGCTCACGTTCCCTTTTGATGGGTGAACAATCCAACGCTTGGCG 6545 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6544 AATTTTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 6485 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 6484 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTTG-C 6426 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 | ||| || ||||||||||||||||||| ||||| Sbjct 6425 TAAAAACTCTTTATACTAAAGGATCGATAGGCCGTGCTTTC 6385 Score = 309 bits (342), Expect = 5e-82 Identities = 237/278 (85%), Gaps = 2/278 (1%) Strand=Plus/Minus Query 4 TAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTCATG 62 ||| ||||||||| || | |||| | |||||||||||||||||| |||||||||| | Sbjct 7967 TAAACGGAATTACTATCGCAACGACCTGCCATCAGTAGGGTAAAACTGACCTGTCTCACG 7908 Query 63 ACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAAT 122 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| | | Sbjct 7907 ACGGTCTAAACCCAGCTCACGTTCCCTGTTAGTGGGTGAACAATCCAACGCTTTGTAATT 7848 Query 123 TCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGA 182 | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7847 TTTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGA 7788 Query 183 ACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCA 242 ||||| ||||||||||| ||||||||||||||||||||||||||| ||| ||| | || | Sbjct 7787 ACGCTCGGCTGCCACAAACCAGTTATCCCTGTGGTAACTTTTCTGACACTTCTTG-CTAA 7729 Query 243 AATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 || || || | | |||||||||||| ||||| Sbjct 7728 AAACTCTTTATACGAGAAGATCGATAGGCCGTGCTTTC 7691 >seq5483 Length=1316098 Score = 320 bits (354), Expect = 3e-85 Identities = 237/274 (86%), Gaps = 2/274 (1%) Strand=Plus/Plus Query 8 CGGAATTACCATTGGGGCGAC-GGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGG 66 ||| ||||| || | |||| || |||||||||||||||||| |||||||||| ||||| Sbjct 1287362 CGGTATTACTATCGCAACGACAGGCCATCAGTAGGGTAAAACTGACCTGTCTCACGACGG 1287421 Query 67 TCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTG 126 ||||||||||||||||||||||| ||||||||||||||||||||||||| | || || Sbjct 1287422 TCTAAACCCAGCTCACGTTCCCTGTTAGTGGGTGAACAATCCAACGCTTTGTAATTTTTG 1287481 Query 127 CTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGC 186 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1287482 CTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGC 1287541 Query 187 TTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATT 246 | ||||||||||| ||||||||||||||||||||||||||| ||||||| | || ||| Sbjct 1287542 TCGGCTGCCACAAACCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTG-CTAAAAAC 1287600 Query 247 TCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 || || |||||||||||||||| ||||| Sbjct 1287601 TCTTTATACAAAAGGATCGATAGGCCGTGCTTTC 1287634 >seq5271 Length=482808 Score = 295 bits (326), Expect = 1e-77 Identities = 209/238 (88%), Gaps = 1/238 (0%) Strand=Plus/Minus Query 2 ACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| ||| ||||| || | ||||| | |||||||||||||||||| |||||||||| Sbjct 372384 ACTAAACGGTATTACTATCGCAACGACGTGCCATCAGTAGGGTAAAACTGACCTGTCTCA 372325 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 |||||||||||||||||||||||||||| ||||||||||||||||||||||||| || Sbjct 372324 CGACGGTCTAAACCCAGCTCACGTTCCCTGTTAGTGGGTGAACAATCCAACGCTTTGTGA 372265 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 || ||||| ||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 372264 TTTTCGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTGT 372205 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 | ||||| ||||||||||| ||| ||||||||||||||||||||||| ||| ||| || Sbjct 372204 GGACGCTCGGCTGCCACAAACCACTTATCCCTGTGGTAACTTTTCTGACACTTCTTGC 372147 >seq2314 Length=17501 Score = 293 bits (324), Expect = 4e-77 Identities = 234/279 (84%), Gaps = 2/279 (1%) Strand=Plus/Plus Query 3 CTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTCAT 61 |||| ||| ||||| || | ||||| | |||||||||||||||||| |||||||||| Sbjct 11433 CTAAACGGTATTACTATCGCAACGACGTGCCATCAGTAGGGTAAAACTGACCTGTCTCAC 11492 Query 62 GACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAA 121 |||||||||||||||||||||||||||| ||||||||||||||||||||| ||| | Sbjct 11493 GACGGTCTAAACCCAGCTCACGTTCCCTGTTAGTGGGTGAACAATCCAACACTTTGTAAT 11552 Query 122 TTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATG 181 || ||||| ||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 11553 TTTCGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTGTG 11612 Query 182 AACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTC 241 ||||| ||||||||||| ||||||||||||||||||||||||||| ||| ||| | || Sbjct 11613 GACGCTCGGCTGCCACAAACCAGTTATCCCTGTGGTAACTTTTCTGACACTTCTTG-CTA 11671 Query 242 AAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 ||| || || | | |||||||||||| ||||| Sbjct 11672 AAAACTCTTTATACGAGAAGATCGATAGGCCGTGCTTTC 11710 >seq38293 Length=772 Score = 197 bits (218), Expect = 2e-48 Identities = 121/129 (94%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 165 AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 772 AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 713 Query 225 CTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGG 284 ||| |||||||||| ||||||| ||| || |||||||||||||||||||| |||||| || Sbjct 712 CTGACACCTCTAGCTTCAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGG 653 Query 285 TTTGTATTC 293 || |||||| Sbjct 652 TTCGTATTC 644 >seq4248 Length=65455 Score = 178 bits (196), Expect = 2e-42 Identities = 165/208 (79%), Gaps = 6/208 (3%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||| || |||| | || |||| | |||||||| |||||||| | || || | Sbjct 46613 CATCAGTAGAGTTTAACTGATATGGCTCACGGCGGTCTAATCCCAGCTCGCATTTCCCGT 46672 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 ||||||||||| ||| |||||||| | | || ||||| | ||||||||||| Sbjct 46673 TAGTGGGTGAATAATGCAACGCTTTGCAATTTTCGCTTCACAACGATAGGAAGAG----- 46727 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCAC-AAGCCAGTTATCC 210 |||||||| |||| ||||||||||| |||||| ||||||||| ||| || |||||||||| Sbjct 46728 ATCGAAGGGTCAAGAAGCAACGTCGTTATGAATGCTTGGCTGTCACAAAACCAGTTATCC 46787 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||||||||||||| ||| ||| ||| || Sbjct 46788 CTGTGGTAACTTTACTGACACTTCTTGC 46815 >seq65360 Length=1371 Score = 113 bits (124), Expect = 8e-23 Identities = 96/117 (82%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | |||| | || |||| |||||||||||||||||| Sbjct 206 TACTGAGCAGTATTACTATCGCAACGACAAGCCACTAGTATAGTAAAACTAACCTGTCTC 265 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTA 116 | |||||||| ||||||||||||||||||| || ||||||||||||||||||| || Sbjct 266 ACGACGGTCTGAACCCAGCTCACGTTCCCTTTTGATGGGTGAACAATCCAACGCATA 322 >seq5436 Length=853657 Score = 98.7 bits (108), Expect = 2e-18 Identities = 95/120 (79%), Gaps = 8/120 (7%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGAC-GGTCATCAGTAGGGTAAAACTA------ACC 53 |||| ||| | ||||| || | |||| || |||||||||||||||||| | | Sbjct 57659 TACTGAGCAGTATTACTATCGCAACGACAGGCCATCAGTAGGGTAAAACTGTTACTTAAC 57718 Query 54 TGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGC 113 ||||||||||||||||||||||||| |||||||||| || ||| | ||||||| ||||| Sbjct 57719 TGTCTCATGACGGTCTAAACCCAGC-CACGTTCCCTTTTGATGGATAAACAATCGAACGC 57777 >seq79221 Length=3022 Score = 93.3 bits (102), Expect = 7e-17 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 |||||||||| | |||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 61 CATCAGTAGGATGAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTTT 2 Query 92 T 92 | Sbjct 1 T 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 853658560224