Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mamestra_20configurata_20[genbank_20GCA_5F002192655.1_202017-06-14] 86,779 sequences; 571,307,853 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq4228 208 6e-49 seq4466 176 4e-39 >seq4228 Length=62806 Score = 208 bits (230), Expect = 6e-49 Identities = 1108/1761 (63%), Gaps = 39/1761 (2%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || || || || || ||||| |||| | || || | ||| |||||||| || || Sbjct 20095 ATCAACAGTAAATTGTATGGCATTCACAGCAGGTTTTGTGCGAAGGTAGTACATTCCTGT 20036 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTC 65196 || | || ||| ||||||||||| || ||||| ||||| | || || || || Sbjct 20035 TTTCAAACCCATTTTCCATGCATAGAAATGAATAGATGACAATTTACCGTAGTTTGGTTC 19976 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 || ||||| ||||| || ||||| || |||||||| | ||| | || |||||||| Sbjct 19975 AGCAACATGGATATTAAAGGACTGGCTTTGATCGATAAATGCACCTCTGTCGGCAGCCAT 19916 Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAAT 65316 | || || | | || || |||||||| || || |||| | | || || | Sbjct 19915 TTGTATTGTAGTTTTTACAGAAATTTCCCAGACAGTTTTATACAAGTCTCTTATTTCTTT 19856 Query 65317 TGGAATCTCCTCAATGTCCTGGACTGAACCACGAC-GTGCAATAATGCGATTACGCATCG 65375 ||||| |||||| || | || ||| | ||| | || | |||| ||| Sbjct 19855 AGGAATAGATTCAATGCTTTGAATAGATCCATTATTGTGGATTA-TAAGATTTTTCATAT 19797 Query 65376 ACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGA 65435 || ||| ||| | || | | || || | ||||||| |||| | ||||||| Sbjct 19796 CTTCGTCCCATAAATCAGCTTCAGTTAAATCATGTAACAAGTGATGATTCACCACTTGGA 19737 Query 65436 ACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAG 65495 |||| || |||| ||||| | || ||||| || || | |||||||| |||||| Sbjct 19736 ACTCACCCGACAAGACACGTCTTTGGTATATGTTTGATGTAAAAGGTTCAAATGATTCAT 19677 Query 65496 TGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTC 65555 | || || | || || || || || ||||||||||| || || | ||| | ||| |||| Sbjct 19676 TATTTCCCAATATCTGTGCTGTGGAAGCAGTTGGCATAGGTGCTAGCAATAGTGAATTTC 19617 Query 65556 GCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACA--TCGGTTTATC 65613 | || | || |||| || | | | ||||||| ||||| || ||| Sbjct 19616 TAAGACCATGTTTTGCAATCTTCTCTTTTAGTGAATCCCAGTCCCACAAATCTGTT---- 19561 Query 65614 GTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAG 65673 | | | | | |||||| || | |||| | || || || || || Sbjct 19560 GGGGTCTT----GTTCCACATGTCATACTGCAATATACCTTGGCTTGCAGGGCTGCCTTC 19505 Query 65674 GAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAA 65733 || | || || ||||| | || || ||| | || |||||| | ||| ||||| || | Sbjct 19504 ATAAGTCTCATATACTCCATGCTTCTCGGCTAATTCACAGCTAGCCTCCAGTGCACCATA 19445 Query 65734 ATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCAT 65793 || || || || || || || |||| | || || | ||||| || || || || Sbjct 19444 GTAGATTGTTTCAAATATTTGTTGATTTAATTTTATAGCAGCTTCGCTTTCATATGGTAT 19385 Query 65794 ACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACG 65853 | ||| | ||||||| || || | |||||||||||||| || ||||| | || | Sbjct 19384 GCGCATTAAAACAAAAGCATCAGCTAATCCTTGAACTCCAATTCCAATGGGTCTGTGCCT 19325 Query 65854 CAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAA 65913 || ||| || | | ||||| || || ||||| | || | ||| ||||| |||| Sbjct 19324 CATATTTGATTTTTTTGCCTCTGGCACTGGGTAAAAGTTCACATCAATAATTTTGTTCAG 19265 Query 65914 ATTGCGTGTCACCACATGCACGATACGTCG--CAATTGTTCGAAATCAAAATGTTTAGGA 65971 ||| || | | | | | || || ||||| |||| | ||||| Sbjct 19264 ATTCTCAGTTAT-AGTTTTA-GTGACTTCTTTCAATTTGATAAAATTGTA-TGTTTT--- 19211 Query 65972 CGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACA 66031 ||| | | |||||| | | |||| || || | ||||||||| Sbjct 19210 --ATCATCATTT---------ACAAACATATTTAATGCAATTGAAGCTAAATTGCAGACA 19162 Query 66032 GCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATG 66091 || | || || | | ||||| || |||||||| ||||| || || ||||| ||| Sbjct 19161 GCAACTTCATCTGCTGAAGTATATTCTACAATTTCAGTGCAAAGGTTGCTGCATTTAATG 19102 Query 66092 GTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGA 66151 ||||| | ||||| || ||||| || | ||||||| ||| || || | |||||| || Sbjct 19101 GTGCCTAGATTCTTCTGGTTACTTTTTCTGTTGCATGAATCTTTATAAAGCATGTATGGT 19042 Query 66152 GTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCAC---- 66207 || || || |||||||| | ||||| || || | ||| | | | | || ||| Sbjct 19041 GTTCCTGTTTCAACTTGTGCTTCAATTATAGCTTTCCACAAAACCTGAGCTCGCACTTGT 18982 Query 66208 CGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACC 66267 ||| | || ||| ||| |||| || | || || | ||| || ||| || Sbjct 18981 TTTACAAAGCGACCTTCCT----GTTCATATTTCTCATACAATGCTTCAAATTCTTCTCC 18926 Query 66268 CCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTG 66327 ||| ||||| | || || || | || |||||||| | |||||| || Sbjct 18925 CCAACAATCGGATAAACCAGGGCAATCATGAGGACACATTATACTCCAATCTTGATTACT 18866 Query 66328 TTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCG 66387 ||| || | |||||||| ||| |||||||| | ||| || || || || | || || Sbjct 18865 TTCAACTCTTTTCATAAATAAATCTGGTATCCATAAGGCATAAAACAGTTCCCTAGCACG 18806 Query 66388 TTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCA 66447 | || || | || ||| || ||| || || || ||||| ||||| |||||||| Sbjct 18805 TACTTCTTCTTTCCCAGTATTCTTTTTCAAATCCAGAAATTCAAATATGTCAGCATGCCA 18746 Query 66448 TGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCG 66507 |||||||| || ||||| || | ||| | ||| || ||||| |||||||| || Sbjct 18745 TGGTTCCAAATATATGGCAAATGCGCCAGGTCTTTTATTACCTCCTTGATCGACGTAACG 18686 Query 66508 AGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 || |||||| | || | |||||||| || || || || || ||||| || || Sbjct 18685 CGCTGTGTTGTTGTAAACTCTTAACATCGGCACAAGACCATTCGACACACCATTTGTACC 18626 Query 66568 GTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGT 66627 | || | ||| | | ||| |||||||| || ||||| ||||| || | Sbjct 18625 AGCTATATAAGTACCTTTGGATCTAATACAGTGAACATGGAGGCCAATCCCACCTGCTGA 18566 Query 66628 CTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTT 66687 || || || ||||| | | || | || || ||||| ||| | || Sbjct 18565 TTTAGAAATTAGTGCACATTGTTTTAGAGTATCATAAATTCCTTCAATACTATCATCTTT 18506 Query 66688 GATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGT 66747 |||| | ||| |||| ||| ||||| || || || || || ||||| || || Sbjct 18505 CATGGCTATAAGGAAGCAAGAAGACAGTTGAGGACGTGGGGTCGCTGCTGAGAAAAGAGT 18446 Query 66748 GGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATC 66807 || | || || ||||| || | ||| | ||||||| || | || | | || Sbjct 18445 TGGGCTTGCATGTGTAAAATATTTTTCAGATAGTAAATTGTATGTGTTAATAGCTCCGTC 18386 Query 66808 AATGTTTTCGCCATGAATCCC 66828 ||| | ||| |||||||| || Sbjct 18385 AATATCTTCACCATGAATGCC 18365 >seq4466 Length=93423 Score = 176 bits (194), Expect = 4e-39 Identities = 150/185 (81%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 61192 CATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAAT 61251 || |||||||||||||| |||| |||||||| || |||||||| || ||||||||||| Sbjct 6749 CACTTCATTAAACATGTACTGGCCTTCTTTGCTGCCTCGGACGGCATTGTCAATGAGAAC 6690 Query 61252 TTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTC 61311 | ||||||| ||| | ||||| ||||||||| | || || | || ||||| |||||| Sbjct 6689 CTGGTGGAACGCTTCTCACAGGAAGTGCAAGTGACTGAAGCAAGATGCTTCTATGGCTTC 6630 Query 61312 CAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATC 61371 |||||||| ||||||||||| ||||| ||||||||| | | ||||| || || ||||| Sbjct 6629 CAGATTGCTATGGAGAATGTACACTCTGAGATGTACTCTCTGCTCATTGACACATACATT 6570 Query 61372 AGGGA 61376 ||||| Sbjct 6569 AGGGA 6565 Score = 107 bits (118), Expect = 2e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 61397 TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATT 61456 |||||||||| || || || | || || ||| ||| || || |||||| | | | Sbjct 6270 TGTTCAATGCTATTGAAACCCTGCCCTGTGTAAAGAAGAAGGCTGACTGGGCCCTGCAGT 6211 Query 61457 GGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGG 61516 ||||| | || | | |||||||||| ||||| | | |||||||| | || || | Sbjct 6210 GGATCGCAAGCAAGTCAGCTACATTTGCAGAACGCATCATCGCATTTGCTGCCGTTGAAG 6151 Query 61517 GTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGC 61576 | | |||||| ||| |||||| | ||||| ||| ||||||| ||||| | |||| Sbjct 6150 GCATCTTTTTCTCTGGCAGTTTTGCCTCTATCTTCTGGATGAAGAAGCGTGGCTTGATGC 6091 Query 61577 CCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGG 61618 |||| |||| |||||||||||| |||| || | || |||| Sbjct 6090 CCGGATTGACTTTCAGCAATGAGCTGATTTCTAGGGATGAGG 6049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397147524504560