Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq4073 136 2e-29 seq109 87.8 7e-15 seq36 82.4 3e-13 >seq4073 Length=941 Score = 136 bits (150), Expect = 2e-29 Identities = 116/143 (81%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || |||||| |||| |||| |||||| | | ||||| ||||||| Sbjct 374 GAGTCGGGTTGCTTGAGAGTGCAGCCCTAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 433 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 ||| | ||||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 434 ATTACCGCGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAAG 493 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||||| Sbjct 494 AGAGAGTTCAAGAGTACGTGAAA 516 >seq109 Length=913180 Score = 87.8 bits (96), Expect = 7e-15 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||| | || |||||||| |||||||||||||||| || ||| | || ||| | Sbjct 471888 GAGCACAAATGCTGGGACCCTGAAGATGGTGAACTATGTTTGGTCAGGATAAACACAGGG 471947 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 ||||| ||| |||||| || |||| ||||| ||||||| | |||||| | ||||||| Sbjct 471948 GAAACCCTGATGGAGGACCGTAGCGATTCTGACGTGCAATTTGATCGTAGGAATTGGGTA 472007 Query 675 T 675 | Sbjct 472008 T 472008 >seq36 Length=1647457 Score = 82.4 bits (90), Expect = 3e-13 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 69 AATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTA 128 || ||| |||||| | | ||||| |||||||||| | ||||||||||||| ||||| | Sbjct 821337 AAGGGGTGGTAAACTCCATCTAAGGCTAAATATTACCGCGAGACCGATAGCGAACAAGCA 821278 Query 129 GAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAG 173 |||| ||||| | ||||| |||||| | || ||||| || || Sbjct 821277 CCGTGAGGGAAAGTTTAAAAGAACTTTGAAGAGCGAGTTCAAGAG 821233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079552317050