Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manduca_20sexta_20[genbank_20GCA_5F000262585.1_202012-05-24] 20,871 sequences; 419,424,057 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq616 251 6e-62 seq200 165 6e-36 >seq616 Length=113079 Score = 251 bits (278), Expect = 6e-62 Identities = 932/1450 (64%), Gaps = 33/1450 (2%) Strand=Plus/Plus Query 65421 GATTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGG 65480 |||| | ||||| || || || || || || || | ||| || ||||| || |||| Sbjct 35479 GATTAACAACTTGAAATTCACCTGATAGAACGCGTCTCTGATATATATTGGAGGTTATGG 35538 Query 65481 GTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGA 65540 ||||||| || ||| | ||||| |||||||| || |||||||| || ||||||||||| | Sbjct 35539 GTTCAAATGACTCATTATTGCCAAGAATTTGAGCTGTAGATGCTGTGGGCATGGGAGCTA 35598 Query 65541 CCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCC 65600 | || | |||||||| | || | || |||| || | ||| | ||||| || Sbjct 35599 CTAAAAGTGAGTTTCTAAGGCCATGTTTTGCAATTTTTTCTTTCAAGGCAGTCCAGTCCC 35658 Query 65601 ACATCGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGG 65660 ||| ||| | | | | | | |||||||| | ||| | |||| || | Sbjct 35659 ACAA--GTTAGTTGGAGTCTTATTC----CACATATCGTATTGTAAAATTCCTTGGCTCG 35712 Query 65661 CCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCT 65720 |||| || || | || || ||||| | | | ||| | ||||||||| | | Sbjct 35713 CCGGACTGCCTTCATAAGTTTCATAGACTCCATATTTTTCGGCTAATTGACAGCTTGCTT 35772 Query 65721 CGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAG-TTCACGTGCCTCATCG 65779 | ||||| | ||||||| || || || || || |||| || || | | ||| || Sbjct 35773 CAAGTGCTCCGTAATAAATTGTTTCAAATATTTGTTGATTTAGCTTTATG-GCCGGTTCA 35831 Query 65780 CTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCG 65839 || ||||| || |||| ||| || | ||| ||||| || | ||||| ||||| ||||| Sbjct 35832 CTATCGTATGGAATACGCATAAGAATAAATGTGTCTGCTAATCCTTGCACTCCTATACCA 35891 Query 65840 ATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCG 65899 || || | || | || |||||| | | || ||||| || ||||| ||||| | || Sbjct 35892 ATTGGTCTGTGTCTCATATTGGATGTTTTAGCTTCAGGAACTGGGTAATAATTAACTTCA 35951 Query 65900 ATAATGCGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCA 65959 ||||| ||| | ||| |||| | | | | || || | ||| |||| Sbjct 35952 ATAATTTTATTAAGATTCTGTGTTATGATTTTT--GTAACTTCTTT-TAGTTT---ATCA 36005 Query 65960 AAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCG 66019 |||| | | ||| | || |||||| || ||| |||| ||| || Sbjct 36006 AAATTGTATGTTTTATCTTCATTG---------ACAAACATGTTAAGTGCAATAGAGGCC 36056 Query 66020 AGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTA 66079 | ||||| ||||| | ||| |||| | || ||||| || ||||| || |||| ||| Sbjct 36057 AAATTGCAAACAGCAACCTCATCAGCTGAAGTGTACTCCACTATTTCAGTACACAAATTG 36116 Query 66080 CTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTAC 66139 ||||| || || || | ||| | ||| ||||| ||||| ||||| | || || ||| Sbjct 36117 CTGCACTTAATAGTTCCTAGATTTTTTTGGTTACTTTTGCGGTTGCACGAGTCTTTATAC 36176 Query 66140 ATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGT 66199 | ||| || || || || || || ||||| | || || || || | ||| ||||| | Sbjct 36177 AACATATATGGTGTTCCCGTTTCTACTTGTGCTTCTATAATAGCTTTCCACAGAGCCTGA 36236 Query 66200 GCCTTCAC---CGTA-CGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTC 66255 || || || | || | | || | | ||| || || | | ||| || || Sbjct 36237 GCTTTAACTTGCTTAACAAATCGATTTTCTTTT----TCATATTTCTTGTATAGTGCCTC 36292 Query 66256 GAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCA 66315 || ||| ||||| || | | | |||||| | || |||||||| || ||| Sbjct 36293 AAATTCTTCTCCCCAACAATCTGCTAAGCCTGGACAGTCATGAGGACACATAAGACTCCA 36352 Query 66316 ATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAG 66375 || ||| ||||| | |||||||| |||||||||||| | || || ||||| Sbjct 36353 ATTTTCATTACTCTCTACTCTTTTCATAAATAAATCAGGTATCCATAAAGCATAAAAGAG 36412 Query 66376 ATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGAT 66435 || | |||||| || || |||| |||||| || || | ||| || || || Sbjct 36413 TTCTCTAGCTCGTACTTCTTCTTTGCCAGTATTTTTTTTCAGATCTAAGAATTCGAAAAT 36472 Query 66436 GTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTG 66495 || |||||||||||||||| ||| | || || | || |||||| ||| ||||| Sbjct 36473 ATCTGCATGCCATGGTTCCAAGTATACTGCAAAAGCTCCAGGACGTTTATTGCCCCCTTG 36532 Query 66496 GTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTT 66555 || || || | || |||||| | || |||||||| || || || || || || Sbjct 36533 ATCTACATATCTGGCAGTATTGTTATACACTCGCAACATAGGGACAAGGCCATTGGAGAC 36592 Query 66556 GCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAAT 66615 ||||| || || | || | ||| || | ||| |||||||| | ||||| Sbjct 36593 ACCATTTGTTCCAGCAATATAAGTGCCTTTGGCTCTTATGCAGTGAACATGGACTCCAAT 36652 Query 66616 ACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAAT 66675 ||| || || | || || || |||||| | | ||| ||||||| ||||| Sbjct 36653 ACCTCCAGCAGATTTAGATATTAAAGCACATTGCTTTAATGTGTCATATATGCCTTCAAT 36712 Query 66676 GGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGC 66735 ||| |||| || | | | | |||||||| || || ||| || || || || Sbjct 36713 ACTATCATCCTTCATTGCAACTAAGAAGCATGAAGATAGCTGTGGTCGTGGCGTTGCTGC 36772 Query 66736 CGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTC 66795 || || | || || | || || ||||| || | |||| |||| || || || Sbjct 36773 TGAAAATAATGTCGGGCTGGCATGGGTAAAATATTTTTCCGACAGTAAATTATATGTATC 36832 Query 66796 GATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATT 66854 || |||||||||| | ||| || || || || | | |||| |||||||| | || || Sbjct 36833 AATTGCAGCATCAATATCTTCACCGTGTATTCCTATAGACACA-CGCATCAGCATGTGTT 36891 Query 66855 GAGGCCGTTC 66864 | |||||||| Sbjct 36892 GTGGCCGTTC 36901 >seq200 Length=575180 Score = 165 bits (182), Expect = 6e-36 Identities = 148/186 (80%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 61191 ACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAA 61250 ||||||||| || ||||| |||| |||||||| || || |||||||| |||||||| || Sbjct 474016 ACATTTCATCAAGCATGTACTGGCATTCTTTGCTGCATCTGACGGTATTGTCAATGAAAA 474075 Query 61251 TTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTT 61310 | | | || | ||| |||| || ||||||||| ||||||| | ||||||||||| || Sbjct 474076 TCTTGTTGAGAGATTCTCGCAAGAAGTGCAAGTGACGGAGGCAAGGTGTTTCTACGGATT 474135 Query 61311 CCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACAT 61370 ||| || |||||||||||||| ||||| ||||||||| | |||||||| || || || Sbjct 474136 CCAAATAGCCATGGAGAATGTGCACTCAGAGATGTACTCATTGCTCATCGACACATATAT 474195 Query 61371 CAGGGA 61376 ||| || Sbjct 474196 CAGAGA 474201 Score = 116 bits (128), Expect = 3e-21 Identities = 161/223 (72%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 61397 TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATT 61456 ||||||| ||||| ||||| | || |||||| ||| || || ||||| | | | Sbjct 474716 TGTTCAACGCCATTGAGACTTTGCCATGTGTGAAGAAGAAGGCAGACTGGGCGCTGCAGT 474775 Query 61457 GGATCACCAGTACAACGGCTACATTTGGTGA-ACGATTGCTGGCATTTGCGGTGGTCGAG 61515 ||||| | || | || || || || || || | ||| | |||| ||||| | ||||| Sbjct 474776 GGATCGCGAGCAAGACCGCCACCTTCGGCGAGAGGATCG-TGGCTTTTGCCGCCGTCGAA 474834 Query 61516 GGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATG 61575 || | || ||| |||| |||||| | || || ||| ||||||| |||||||| ||| Sbjct 474835 GGCATTTTCTTCTCTGGAAGCTTTGCCTCCATATTCTGGCTGAAGAAGCGTGGACTCATG 474894 Query 61576 CCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGG 61618 || || || |||||||||||||||||||| || | || |||| Sbjct 474895 CCTGGACTTACCTTCAGCAATGAGTTGATCTCTAGAGATGAGG 474937 Score = 100 bits (110), Expect = 2e-16 Identities = 99/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 61024 AATGAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAG 61083 || || |||||| ||| |||||||| ||||| || || | |||||||| | || Sbjct 473404 AAGGAGCCCCTACTGCGGGAGAATCCCCGTCGCTTTGTTATTTTCCCCATTCAATACCCT 473463 Query 61084 GATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGAT 61143 ||||||||| |||||||||||||| |||||||| |||||||| |||||||| || ||| Sbjct 473464 GATATTTGGGAGATGTACAAAAAGGCCGAAGCTTCTTTCTGGACCGTGGAGGAAGTTGAT 473523 Query 61144 TTGTCCAA 61151 | || || Sbjct 473524 CTATCAAA 473531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397466872491440