Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq17783 194 3e-47 >seq17783 Length=17731 Score = 194 bits (214), Expect = 3e-47 Identities = 240/325 (74%), Gaps = 9/325 (3%) Strand=Plus/Minus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| |||||||||| |||||| ||| || ||||||| || |||||| | || | Sbjct 16820 AGGGGAGTGAAATAGATCCTGAAACCGTATGCGTACAAGCAGTGGGAGCCACTTTGTTAG 16761 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 ||||| |||| ||||||| |||||| | | ||| ||| | ||| ||||| |||| Sbjct 16760 GTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATT--TCAGTGGCGAGCTTAACC 16703 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190 | | || || || || ||||||||| ||||| |||||| | ||| | ||| Sbjct 16702 GAATAGGGG-----AGGCGTAGCGAAAGCGAGTCTTAATAGGGCGTCTAGTCGCTGGGAA 16648 Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGA-TG 249 ||||| ||||||| | |||||| ||| | ||||||||||| |||||| | ||| || Sbjct 16647 TAGACCCGAAACCGGGCGATCTATCCATGGGCAGGTTGAAGGTTAGGTAACAC-TGACTG 16589 Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309 ||||||||||||| | |||||||||||| |||||||| | || | || |||||||| Sbjct 16588 GAGGACCGAACCGACTACCGTTGAAAAGTTAGCGGATGACCTGTGGATCGGAGTGAAAGG 16529 Query 310 CCAATCAAACTGGGAAATAGCTCGT 334 | |||||| || ||| |||||| || Sbjct 16528 CTAATCAAGCTCGGAGATAGCTGGT 16504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972561907200