Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq649 264 3e-68 >seq649 Length=510 Score = 264 bits (292), Expect = 3e-68 Identities = 300/400 (75%), Gaps = 3/400 (1%) Strand=Plus/Minus Query 10 AGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTT 69 |||| ||| ||||||| |||||||||||||||||||||||||||| | |||||||| Sbjct 433 AGAAGAAGTGACGGCTAAATACGTGCCAGCAGCCGCGGTAATACGTATGTCACAAGCGTT 374 Query 70 AATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCC 129 | |||| ||| ||||||||||||| | ||| |||| | |||| | | ||||||| Sbjct 373 ATCCGGATTTATTGGGCGTAAAGCGCGTCTAGGTGGTTATATAAGTCTGATGTGAAAATG 314 Query 130 CCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGT 189 | ||||| ||| | | ||||| || | |||| |||||||| ||||| | Sbjct 313 CAGGGCTCAAC-TCTGTATTGCGTTGGAAACTGTGTAACTAGAGTACTGGAGAGGTAAGC 255 Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||| | || |||||| ||||||| ||||||||| || ||||| || |||| |||| | Sbjct 254 GGAACTACAAGTGTAGAGGTGAAATTCGTAGATATTTGTAGGAATGCCGATGGGGAAGCC 195 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 ||| |||| | ||||||||| | || |||||||||||| |||||||||||||||| Sbjct 194 AGCTTACTGGACAGATACTGACGCTGAAGCGCGAAAGCGTGGGTAGCAAACAGGATTAGA 135 Query 310 TACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACTTCCTTGG 369 ||||||||||||||||||| |||||||| ||||| |||||||| | | ||| | Sbjct 134 TACCCTGGTAGTCCACGCCGTAAACGATGATTACTAGGTGTTGGGGGTCGA--ACCTCAG 77 Query 370 TAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | ||| |||||| |||| ||||||||||| ||| Sbjct 76 CGCCCAAGCAAACGCGATAAGTAATCCGCCTGGGGAGTAC 37 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289284370400