Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= AAMG01001161.1 Length=375 Score E Sequences producing significant alignments: (Bits) Value seq16187 150 4e-34 >seq16187 Length=510 Score = 150 bits (166), Expect = 4e-34 Identities = 183/229 (80%), Gaps = 23/229 (10%) Strand=Plus/Minus Query 1 GCGACGTAGAATGTTCGTTTCGGCAGGTCTTTCGCCAGCCGGAATCTTCGCTTGTAGCTT 60 |||||||||| ||| |||| |||||||||||| ||||||||||||||| ||| |||||| Sbjct 214 GCGACGTAGA-TGT-CGTT-CGGCAGGTCTTT-GCCAGCCGGAATCTT-GCT-GTAGCT- 162 Query 61 CATTCGGGCGTTGCCCCCGTTAATTCGGCCAAGAA-ACTTCGGCCGGATTGGCCTAAAAG 119 |||| ||||||||||||||| | | | |||| || |||| |||||||||| || ||||| Sbjct 161 CATT-GGGCGTTGCCCCCGT--AGTTGACCAAAAACACTT-GGCCGGATTGACCAAAAAG 106 Query 120 TTGGCGGCGATTATAGGCACATTCTGGCGCCGATGCCATTGCGCCAGAACGTCGTAC--- 176 | |||||||||||||||||||||| |||||| |||| | |||||| ||||| | Sbjct 105 T-GGCGGCGATTATAGGCACATTCCTACGCCGACGCCA-CGTACCAGAA-GTCGTGCAGA 49 Query 177 GGTCATTCGTCTTTGCGGCTGATA-ACGCGGGTCGCTGGCTTGCAGTTG 224 | ||| ||| |||| |||||| || ||||| |||| || ||||| Sbjct 48 GCTCAGTCG----TGCGCCTGATAGACCGGGGTCTGTGGCCTGAAGTTG 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1097331362400