Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= AAMG01001212.1 Length=311 Score E Sequences producing significant alignments: (Bits) Value seq15690 237 3e-60 >seq15690 Length=574 Score = 237 bits (262), Expect = 3e-60 Identities = 233/301 (77%), Gaps = 0/301 (0%) Strand=Plus/Plus Query 11 TTTTTTCACCCGCGTTTCTGGCTGTTATGGCTGGGGCTCGGCCTGCTGTGGCTGGTCACC 70 |||||||||||||||||||||||| ||||| || || || || |||||||| || Sbjct 243 TTTTTTCACCCGCGTTTCTGGCTGCTATGGTGCGGCCTGGGGCTTTTGTGGCTGATCGTT 302 Query 71 CAGTTGCCCTACCGTGCGCTGTTGACCATTGGTCGCCTGCTGGGTGCGGGGATGTACCGT 130 |||||||| |||| |||| || | ||||| | ||||| ||| ||||||||| Sbjct 303 CAGTTGCCTTACCCGTTGCTGCTGCGGGTCGGTCGTGTCCTGGGGGCGCTGATGTACCGG 362 Query 131 GTGGCCGGCGAACGCCGCCGCATCGCCGCGCGAAACCTGGAACTGTGCTTCCCGGAAAAA 190 | || ||||| || || ||||||||| ||| |||||||| ||||| || ||| ||| Sbjct 363 GCAGCGGGCGACCGACGGCGCATCGCCAAGCGCAACCTGGAGCTGTGTTTTCCGCAAATG 422 Query 191 TCCGCGAAAGAGCGTAAACATTTGCTTAAAGAAAACTTTGCCTCCACCGGCATCGCCTTC 250 ||| || ||||| || ||| |||| || ||||| |||||||||||||| ||||||||| Sbjct 423 TCCACGGCTGAGCGCAAGCATCTGCTCAAGGAAAATTTTGCCTCCACCGGTATCGCCTTC 482 Query 251 TTTGAGATGGCCATGAGCTGGTGGTGGTCGCGCCAGCGCCTGGCGCGCCTGGCCCACGTC 310 || || |||||||||||||||||||||||||| ||| ||||| | ||||| || ||| Sbjct 483 TTCGAAATGGCCATGAGCTGGTGGTGGTCGCGTTCGCGGCTGGCCAGGCTGGCTCATGTC 542 Query 311 G 311 | Sbjct 543 G 543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 892581487200