Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= AAMG01001262.1 Length=237 Score E Sequences producing significant alignments: (Bits) Value seq11011 311 1e-82 >seq11011 Length=720 Score = 311 bits (344), Expect = 1e-82 Identities = 202/214 (94%), Gaps = 6/214 (3%) Strand=Plus/Plus Query 24 TCGAGATCCAGGAACGCGGCGGTCTTGCCGGTGCCGGTCTGGGCGCGGCCGAATGGCGTC 83 |||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct 460 TCGAGATC-AGGAACGCGGCGGTCTTGCCGGTGCCGGTCTGGGCGCGACCGA-TGGCGTC 517 Query 84 TTTTGCCGGCCAGGGTGAAACCCAGCACCTAGCGCCTTGGATCGGCGTGCAGTACGGGAA 143 ||| |||||| |||||||| |||||||||| |||||| |||||||||||||||||||||| Sbjct 518 TTT-GCCGGCGAGGGTGAAGCCCAGCACCT-GCGCCT-GGATCGGCGTGCAGTACGGGAA 574 Query 144 ACCCAGGTCCTGGATGGCGTGCATCAGTTCCGGGGCCAGTTTGAAATCGTGGAAGCGGGT 203 |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct 575 GCCCAGGTCCTGGATGGCGTGCATCAGTTCCGGGG-CAGCTTGAAATCGTGGAAGCGGGT 633 Query 204 CTTGCCTTCCTGGGGCTCGACGACGAAGTCTTCG 237 |||||||||||||||||||||||||||||| ||| Sbjct 634 CTTGCCTTCCTGGGGCTCGACGACGAAGTCCTCG 667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 659043702650