Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= AAMG01001377.1 Length=151 Score E Sequences producing significant alignments: (Bits) Value seq4632 185 7e-45 >seq4632 Length=836 Score = 185 bits (204), Expect = 7e-45 Identities = 133/151 (88%), Gaps = 2/151 (1%) Strand=Plus/Minus Query 1 CGAAAATTGCTGAAGATGCCATCGCCCAAGTGCGCGCCCAGGTCGGCACTGACAACGTAT 60 ||||||| |||||||| ||||||||| | | ||||||||||||||||| |||||||| Sbjct 468 CGAAAATCGCTGAAGACGCCATCGCCAACATCCGCGCCCAGGTCGGCACCGACAACGTGC 409 Query 61 TGCTTGGCCTGTCCGGCGGCGTTGACTCCTCGGTTGTAGCGGCACTGCTGCACAAGGCCA 120 ||| ||| |||||||||||||||||||||||||| || || || |||||||||||||||| Sbjct 408 TGC-TGGGCTGTCCGGCGGCGTTGACTCCTCGGTGGTTGC-GCGCTGCTGCACAAGGCCA 351 Query 121 TCGGCGACCAACTGACCTGCGTGTTTGTCGA 151 |||||||||| ||||||||||| || ||||| Sbjct 350 TCGGCGACCAGCTGACCTGCGTCTTCGTCGA 320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 383908953000