Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= AAMG01001436.1 Length=198 Score E Sequences producing significant alignments: (Bits) Value seq13607 273 2e-71 >seq13607 Length=500 Score = 273 bits (302), Expect = 2e-71 Identities = 180/198 (91%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 1 CGACCTTTTTGCTCGCCTTCAAGCGCCGGCCGGCGTTGTTGATCGCCAGCTCCGCCAGGG 60 ||||||| ||||||||||| | ||| |||| |||||||||||||||||| || ||||||| Sbjct 280 CGACCTTCTTGCTCGCCTTGAGGCGACGGCGGGCGTTGTTGATCGCCAGTTCGGCCAGGG 221 Query 61 CCAGGCCCAGTTCCGGATGCTCGTTGAGCCACAGGCTGAAGGCGTCCTTGACCACGCCAG 120 |||||||||| ||||||||| | |||||||||||||||||||||||||||||||| || | Sbjct 220 CCAGGCCCAGCTCCGGATGCGCATTGAGCCACAGGCTGAAGGCGTCCTTGACCACACCGG 161 Query 121 AGACAAACGCCGCTGCCTCGCGGGACGACAGGCGCTCCTTGGTCTGCCCGGAGAATTGCG 180 ||||||||||||| ||||||||||||||||||||||| |||||||| |||||||| |||| Sbjct 160 AGACAAACGCCGCCGCCTCGCGGGACGACAGGCGCTCTTTGGTCTG-CCGGAGAACTGCG 102 Query 181 GTTCCTGCATCTTCATCG 198 | |||||||| ||||||| Sbjct 101 GCTCCTGCATTTTCATCG 84 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534273292925