Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= AAMG01001720.1 Length=447 Score E Sequences producing significant alignments: (Bits) Value seq19127 425 1e-116 >seq19127 Length=839 Score = 425 bits (470), Expect = 1e-116 Identities = 264/283 (93%), Gaps = 0/283 (0%) Strand=Plus/Plus Query 165 TCGACTTGCAGGCGTTCTACGGGTTGAAGCTGGATTCCGGAGGCGACCTCAACGACAAGG 224 |||| |||||||||||||||| ||||| ||||||||||| ||||||||||||||||||| Sbjct 1 TCGATCTGCAGGCGTTCTACGGCTTGAAACTGGATTCCGGCGGCGACCTCAACGACAAGG 60 Query 225 ACCACCAGAGCCGTTACCCCGGCAGCATGTTCCCGCTGGACAACGGCAAATCCGCCGACC 284 | |||||| |||| |||||||||||||| ||||||||||||||||||||||||||||| | Sbjct 61 ATCACCAGGGCCGCTACCCCGGCAGCATATTCCCGCTGGACAACGGCAAATCCGCCGATC 120 Query 285 AGTTCGGCGTGCTCAGCCCGACGTTCAAGATGCGCTTCGCCAAAGATGAGCTGCGTGTGG 344 ||||||||||||||||||||||||||||||||||||| ||||| |||||| |||| || | Sbjct 121 AGTTCGGCGTGCTCAGCCCGACGTTCAAGATGCGCTTTGCCAAGGATGAGTTGCGCGTCG 180 Query 345 GCACGCTGTACGGCAACAACCCGGTGCTGGCCAACACCGACGGCCGCCTGTACCAGCAGA 404 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 181 GTACGCTGTACGGCAACAACCCGGTGCTGGCCAACACCGACGGACGCCTGTACCAGCAGA 240 Query 405 CCAATACCGGGGTGCAACTGGTGTCCAGGGACCTCAGCGACTT 447 |||||||||| |||||||||||||||| ||||||||||||||| Sbjct 241 CCAATACCGGTGTGCAACTGGTGTCCAAGGACCTCAGCGACTT 283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1327674972000