Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq649 248 1e-63 >seq649 Length=510 Score = 248 bits (274), Expect = 1e-63 Identities = 225/282 (80%), Gaps = 1/282 (0%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||||| ||||||||||| |||||||| || | | |||| ||| || | Sbjct 152 CCCACGCTTTCGCGCTTCAGCGTCAGTATCTGTCCAGTAAGCTGGCTTCCCCATCGGCAT 211 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||| | ||||||||| |||||||| |||||| | | ||||| || ||||||||| || Sbjct 212 TCCTACAAATATCTACGAATTTCACCTCTACACTTGTAGTTCCGCTTACCTCTCCAGTAC 271 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || | |||||||| || ||| | | ||||||||| |||||||||| |||| Sbjct 272 TCTAGTTACACAGTTTCCAACGCAATACA-GAGTTGAGCCCTGCATTTTCACATCAGACT 330 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | | || |||| |||| |||||| |||||||||||||||||||||||| || |||| Sbjct 331 TATATAACCACCTAGACGCGCTTTACGCCCAATAAATCCGGATAACGCTTGTGACATACG 390 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 |||||||||||||||||||||||| |||||||| ||| ||| Sbjct 391 TATTACCGCGGCTGCTGGCACGTATTTAGCCGTCACTTCTTC 432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828603490225