Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq8414 237 3e-60 seq8257 141 2e-31 >seq8414 Length=689 Score = 237 bits (262), Expect = 3e-60 Identities = 171/196 (87%), Gaps = 1/196 (1%) Strand=Plus/Plus Query 99 AGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACCGGC 158 ||||||||||| | |||||||||||||||||||||| | ||||||||||| |||||||| Sbjct 3 AGGAAGGCTTCCT-GTGGAATTTCCACGTTGCCCACCTGTTTCATGCGTTTCTTACCGGC 61 Query 159 CTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCAG 218 ||| |||||||| |||||||| |||||| || ||||||||||||||||||||||||| Sbjct 62 CTTCTGCTTCTCGAGCAGCTTCTTCTTACGACTGACGTCACCGCCGTAGCATTTGGCCAA 121 Query 219 TACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCCAATGGCGGC 278 ||||||||||||||| |||||||||| ||||| || | |||||| || || |||||||| Sbjct 122 TACGTTCTTTCTGAGCGCCTTGACGGTTGTCCGGGCCACGATCTGACCACCGATGGCGGC 181 Query 279 CTGGATCGCGACGTCG 294 ||| ||||| |||||| Sbjct 182 CTGAATCGCCACGTCG 197 >seq8257 Length=508 Score = 141 bits (156), Expect = 2e-31 Identities = 81/83 (98%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 1 TCGAGCAACGCCAGGAGACCACAGACGGCAACGGCGATGACCAGCAACAGCGGGAAATTT 60 |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct 426 TCGAGCAACGCCAGGAGACCGCAAACGGCAACGGCGATGACCAGCAACAGCGGGAAATTT 485 Query 61 AGCGACATAGGACCTAACTATCC 83 ||||||||||||||||||||||| Sbjct 486 AGCGACATAGGACCTAACTATCC 508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838194801600