Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq649 338 2e-90 >seq649 Length=510 Score = 338 bits (374), Expect = 2e-90 Identities = 310/390 (79%), Gaps = 5/390 (1%) Strand=Plus/Minus Query 19 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTA 78 ||||||| |||||||||||||||||||||||||||| | | ||||||||||||| ||| Sbjct 422 CGGCTAAATACGTGCCAGCAGCCGCGGTAATACGTATGTCACAAGCGTTATCCGGATTTA 363 Query 79 CTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAAC 138 ||||||||||| | | ||||||||| |||||| || |||||| | |||||||| Sbjct 362 TTGGGCGTAAAGCGCGTCTAGGTGGTTATATAAGTCTGATGTGAAAATGCAGGGCTCAAC 303 Query 139 CCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAG 198 | | | ||| || ||||||| ||||||| | |||| || ||| |||| | | || Sbjct 302 TCTGT-ATTGCGTTGGAAACTGTGTAACTAGAGTACTGGAGAGGTAAGCGGAACTACAAG 244 Query 199 TGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGA 258 ||||| |||||||| |||||||||| | ||||| || ||| |||| | |||| ||||| Sbjct 243 TGTAGAGGTGAAATTCGTAGATATTTGTAGGAATGCCGATGGGGAAGCCAGCTTACTGGA 184 Query 259 CTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAG 318 | | |||||| |||| || |||||||||||| ||||||||||||||||||||||||||| Sbjct 183 CAGATACTGACGCTGAAGCGCGAAAGCGTGGGTAGCAAACAGGATTAGATACCCTGGTAG 124 Query 319 TCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGTGCCGCAGC 378 ||||||||||||||||||| |||||||||| |||| | | | | | ||| ||| Sbjct 123 TCCACGCCGTAAACGATGATTACTAGGTGTTGGGGGTC----GAACCTCAGCGCCCAAGC 68 Query 379 AAACGCAATAAGTATTCCACCTGGGGAGTA 408 |||||| ||||||| ||| ||||||||||| Sbjct 67 AAACGCGATAAGTAATCCGCCTGGGGAGTA 38 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202905516800