Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq5005 515 7e-144 seq2174 163 5e-38 >seq5005 Length=1206 Score = 515 bits (570), Expect = 7e-144 Identities = 300/309 (97%), Gaps = 2/309 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 692 GAACGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 751 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 752 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 811 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 ||||||||||||||||||||||||||||||||||||||| ||||||| | ||||| ||| Sbjct 812 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTTCTT--CCTTGACCG 869 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 870 AAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 929 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 930 CTCTTCAACGAGGAATGCCTAGTAAGCGCATGTCATCAGCATGCGTTGATTACGTCCCTG 989 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 990 CCCTTTGTA 998 >seq2174 Length=10963 Score = 163 bits (180), Expect = 5e-38 Identities = 172/223 (77%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct 7244 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCTGGGCTGCACGCGCGCTAC 7302 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 | ||| | ||||| || || ||| ||||| ||||| |||||| | | || | Sbjct 7303 AATGAAGGTATCAACGTGT--ATTTCCTAGGCCGAGAGGTCCGGGTAAACCGCTGAACCA 7360 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 | || |||| ||||| | | | || || | || | | | ||| ||||| || |||||| Sbjct 7361 CCTTCTTGCTTGGGATTGTGAACTGAAACTGTT-CACATGAACCTGGAATTCCCAGTAAG 7419 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||| ||||| | | ||| |||||||||||||||||||||||| Sbjct 7420 TGCGAGTCATTAACTCGCATTGATTACGTCCCTGCCCTTTGTA 7462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946968172800