Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq17783 379 7e-103 >seq17783 Length=17731 Score = 379 bits (420), Expect = 7e-103 Identities = 378/483 (78%), Gaps = 9/483 (2%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| || |||||| | |||||||||| ||||||||||||| | |||||| |||| Sbjct 16679 CGAGTCTTAATAGGGCGTCTAGTCGCTGGGAATAGACCCGAAACCGGGCGATCTATCCAT 16620 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 || |||| ||||||| |||||||| ||||||| ||||||| |||| |||||||| | Sbjct 16619 GGGCAGGTTGAAGGTTAGGTAACACTGACTGGAGGACCGAACCGACTACCGTTGAAAAGT 16560 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 ||| |||||| |||||| | || |||||||||||| ||| || ||| ||||||||||||| Sbjct 16559 TAGCGGATGACCTGTGGATCGGAGTGAAAGGCTAATCAAGCTCGGAGATAGCTGGTTCTC 16500 Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATCGGGGGTAGAGCACTGTTATGG 240 ||||| |||||||||||| |||||| ||||||| | ||||||||||||||||| || Sbjct 16499 CTCGAAAGCTATTTAGGTAGCGCCTCATGTATCACTGTAGGGGGTAGAGCACTGTTTCGG 16440 Query 241 CTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGT-TTTAC 299 |||||||||||| |||||||||||||| |||||||||||||| | | ||| | Sbjct 16439 CTAGGGGGTCATCCCGACTTACCAAACCGATGCAAACTCCGAATACCTACAAGTGCCGAG 16380 Query 300 CGCGGGAG--TGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACT 357 | ||||| | ||| ||||||||| |||||| | ||| || || || ||| Sbjct 16379 CATGGGAGACACACGGC--GGGTGCTAACGTCCGTCGTGAAAAGGGAAACAACCCAGACC 16322 Query 358 ATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACA 417 |||||||||| ||| || | | | ||||| | ||||| || || ||| ||||| Sbjct 16321 GTCAGCTAAGGTCCCAAAGTTATGGTTAAGTGGGA--AACGATGTGGGAAGGCTTAGACA 16264 Query 418 GCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTC 477 ||||||| |||||||| |||||||||| | |||||||| |||||| |||||||||||| Sbjct 16263 GCTAGGAGGTTGGCTTAGAAGCAGCCA-CCCTTTAAAGAAAGCGTAATAGCTCACTAGTC 16205 Query 478 GAG 480 ||| Sbjct 16204 GAG 16202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689186470400