Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= AAMG01002205.1 Length=300 Score E Sequences producing significant alignments: (Bits) Value seq21544 116 6e-24 >seq21544 Length=958 Score = 116 bits (128), Expect = 6e-24 Identities = 132/177 (75%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 94 GGCCACCGCAAGAGGATGGGTGACATACGCCTCGCCACTACGTCGGCGTTGGCCGTCGTG 153 |||||| || || || || || || || | ||| || || || || ||||| || ||||| Sbjct 954 GGCCACGGCCAGCGGGTGCGTCACGTAGGGCTCACCGCTGCGACGACGTTGCCCATCGTG 895 Query 154 GGCTTGTTCGGCGTAGAAATACGCTCGGCGAACCAGGTTGACCTGGTCTGCGCCGAGGTA 213 || |||||||||||||| || || || || |||||||||||||| || | ||| ||||| Sbjct 894 CGCCTGTTCGGCGTAGAAGTAGGCGCGCCGTACCAGGTTGACCTGTTCGGGGCCTAGGTA 835 Query 214 GGCCGATAAGCGATCGGCGAGGGCGTCTATGCTCGGCAAAGTGTGAACTCCTGCCGA 270 | ||| | || ||||| | ||| ||||| | ||||| | | |||||||||| Sbjct 834 AGTCGACAGCCGTTCGGCCAAGGCCTCTATACCCGGCATGGCTTAGCCTCCTGCCGA 778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 857390102400