Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mayetiola_20destructor_20[genbank_20GCA_5F000149185.1_202010-10-18] 24,475 sequences; 185,827,756 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq19436 870 0.0 seq2174 392 1e-106 seq9831 87.8 5e-15 >seq19436 Length=1259 Score = 870 bits (964), Expect = 0.0 Identities = 496/504 (98%), Gaps = 1/504 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1241 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 1182 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1181 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 1122 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 1121 TCTCAGGCTCCCTCTCCGGAGTCGAACCCTAATTCCCCGTTACCCGTTGAAACCATGGTA 1062 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1061 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 1002 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| Sbjct 1001 CAAGGCCATGCGATTCGTTAAGTTATTATGATTCACCAAGGAGCCCCGAAGGGCATTGGT 942 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 941 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTGTAGCATGTATTAGCTCTAG 882 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 881 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 822 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct 821 GCCATTCGCAGTTTCACCGTATAG-TTGCTTATACTTAGACATGCATGGCTTAATCTTTG 763 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 762 AGACAAGCATATGACTACTGGCAG 739 >seq2174 Length=10963 Score = 392 bits (434), Expect = 1e-106 Identities = 413/537 (77%), Gaps = 40/537 (7%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAA---GAGCCCTGTATCAGTATTTATTGTCACTA 57 |||||||||||||||||||| || | ||| | ||||| ||||| | ||||||| Sbjct 6167 GTACTCATTCCAATTACAAGGCCTCGGATGTGAGTCTTGTATTGTTATTTTTCGTCACTA 6108 Query 58 CCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCC 117 |||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||| Sbjct 6107 CCTCCCCGTGCTGGGAGTGGGTAATTTACGCGCCTGCTGCCTTCCTTAGATGTGGTAGCC 6048 Query 118 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATG 177 ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| | Sbjct 6047 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTGCAACCAAG 5988 Query 178 GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 ||| ||| | |||| || | ||||||||||||||| ||||||| || || |||||| Sbjct 5987 GTAATCCAAGACATTACCTTCAATAGTTGATAGGGCAGACATTTGAAAGATCCGTCGCCG 5928 Query 238 GCTCAAGGCCATGCGATTCGTTAAGTTATTATGA-ATCACCAAG-----------GAGCC 285 | | || |||||||| || || |||| || ||| | || || | Sbjct 5927 GTACGAGACCATGCGA-TCAACAAATTATCCAGAGTTCAACCAGTTTAAATGTGAGAACG 5869 Query 286 CCGAAGGG-----CGTTGGTTTTTTATCTAATAAATAC-----ACCCCTT---CCGAAGT 332 ||||| | | |||| ||| |||||||||| | |||| || ||| | Sbjct 5868 CCGAAACGCTCCCCATTGG-TTTAAATCTAATAAAAGCAGAGAACCCGTTTTACCGGTTT 5810 Query 333 CGGGGTTTTTA---GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGT--AAG 387 | | |||| |||||||||||||||||||||||||| |||||||| ||| | | Sbjct 5809 C----TCTTTAAATGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAATTGTGG 5754 Query 388 GTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT 447 ||| ||| || |||| ||||||||| ||||||||| || || |||||||| ||| | Sbjct 5753 ATACGATCTAAGAAACCATAACTGATATAATGAGCCTTTTGCGGTTTCACTTTAT-TTTC 5695 Query 448 GCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 | || |||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 5694 GTTTGTACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATAACTACTGGCAG 5638 >seq9831 Length=607 Score = 87.8 bits (96), Expect = 5e-15 Identities = 50/51 (98%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 454 ACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1 ACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATAACTACTGGCAG 51 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510030329600