Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1413 192 1e-46 seq378 192 1e-46 seq1538 179 7e-43 seq858 159 6e-37 seq217 149 1e-33 seq672 95.1 2e-17 seq1592 77.0 6e-12 seq377 75.2 2e-11 >seq1413 Length=13777 Score = 192 bits (212), Expect = 1e-46 Identities = 218/286 (76%), Gaps = 10/286 (3%) Strand=Plus/Minus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| |||| ||| |||| || | ||| | || ||||||||||| ||||||||||| | Sbjct 3268 TGCTCTTCGCTGAGTGTCGAGGTGGGCCGGTACGTTTACTTTGAACAAATTAGAGTGCTT 3209 Query 100 AAAGCAGGC---CTTTGCTCGAATACATTA-GCATGGAATAATAGAATAGGACGTGCGGT 155 ||||||||| ||| || ||||| | |||||||||||| ||||||||| | |||| Sbjct 3208 AAAGCAGGCTATCTTCGCCTGAATATTCTGTGCATGGAATAATGGAATAGGACCT-CGGT 3150 Query 156 TCTATTTTGTTGGTTTCTAGGACCGCCG---TAATGATTAATAGGGATAGTCGGGGGTGT 212 |||||||||||||||| | ||| | ||| |||||||||||||||| || ||||| | Sbjct 3149 TCTATTTTGTTGGTTT-TCGGAACCCCGAGGTAATGATTAATAGGGACAGATGGGGGCAT 3091 Query 213 CAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAG 272 ||||| || ||||||||||||||||||| ||||| || ||||||| Sbjct 3090 TCGTATTGCGACGTTAGAGGTGAAATTCTTGGATCGTCGCAAGACGGACAGAAGCGAAAG 3031 Query 273 CGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 | || |||| |||||||||||||||| ||||||||||||| || Sbjct 3030 CATTTGCCAAAAATGTTTTCATTAATCA-AGAACGAAAGTTAGAGG 2986 >seq378 Length=21700 Score = 192 bits (212), Expect = 1e-46 Identities = 218/286 (76%), Gaps = 10/286 (3%) Strand=Plus/Plus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| |||| ||| |||| || | ||| | || ||||||||||| ||||||||||| | Sbjct 2694 TGCTCTTCGCTGAGTGTCGAGGTGGGCCGGTACGTTTACTTTGAACAAATTAGAGTGCTT 2753 Query 100 AAAGCAGGC---CTTTGCTCGAATACATTA-GCATGGAATAATAGAATAGGACGTGCGGT 155 ||||||||| ||| || ||||| | |||||||||||| ||||||||| | |||| Sbjct 2754 AAAGCAGGCTATCTTCGCCTGAATATTCTGTGCATGGAATAATGGAATAGGACCT-CGGT 2812 Query 156 TCTATTTTGTTGGTTTCTAGGACCGCCG---TAATGATTAATAGGGATAGTCGGGGGTGT 212 |||||||||||||||| | ||| | ||| |||||||||||||||| || ||||| | Sbjct 2813 TCTATTTTGTTGGTTT-TCGGAACCCCGAGGTAATGATTAATAGGGACAGATGGGGGCAT 2871 Query 213 CAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAG 272 ||||| || ||||||||||||||||||| ||||| || ||||||| Sbjct 2872 TCGTATTGCGACGTTAGAGGTGAAATTCTTGGATCGTCGCAAGACGGACAGAAGCGAAAG 2931 Query 273 CGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 | || |||| |||||||||||||||| ||||||||||||| || Sbjct 2932 CATTTGCCAAAAATGTTTTCATTAATCA-AGAACGAAAGTTAGAGG 2976 >seq1538 Length=665 Score = 179 bits (198), Expect = 7e-43 Identities = 213/282 (76%), Gaps = 10/282 (4%) Strand=Plus/Plus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| |||| ||| |||| || | ||| | || ||||||||||| ||||||||||| | Sbjct 387 TGCTCTTCGCTGAGTGTCGAGGTGGGCCGGTACGTTTACTTTGAACAAATTAGAGTGCTT 446 Query 100 AAAGCAGGC---CTTTGCTCGAATA-CATTAGCATGGAATAATAGAATAGGACGTGCGGT 155 ||||||||| ||| || ||||| | |||||||||||| ||||||||| | |||| Sbjct 447 AAAGCAGGCTATCTTCGCCTGAATATTCTGTGCATGGAATAATGGAATAGGACCT-CGGT 505 Query 156 TCTATTTTGTTGGTTTCTAGGA---CCGCCGTAATGATTAATAGGGATAGTCGGGGGTGT 212 |||||||||||||||| | ||| ||| ||||||||||||||||| || ||||| | Sbjct 506 TCTATTTTGTTGGTTT-TCGGAACCCCGAGGTAATGATTAATAGGGACAGATGGGGGCAT 564 Query 213 CAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAG 272 ||||| || ||||||||||||||||||| ||||| || |||||| Sbjct 565 TCGTATTGCGACGTTAGAGGTGAAATTCTTGGATCGTCGCAAGACGGACAGAAACGAAAG 624 Query 273 CGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTA 314 | || |||| |||||||||||||||| ||||||||| || Sbjct 625 CATTTGCCAAAAATGTTTTCATTAATCA-AGAACGAAAGGTA 665 >seq858 Length=20491 Score = 159 bits (176), Expect = 6e-37 Identities = 185/243 (76%), Gaps = 10/243 (4%) Strand=Plus/Minus Query 83 AAAAAATTAGAGTGTTCAAAGCAGGC---CTTTGCTCGAATACATTA-GCATGGAATAAT 138 |||||| ||||| | ||||||||| ||| || ||||| | |||||||||||| Sbjct 14759 AAAAAAAAGGAGTGCTTAAAGCAGGCTATCTTCGCCTGAATATTCTGTGCATGGAATAAT 14700 Query 139 AGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCG---TAATGATTAATA 195 ||||||||| | |||||||||||||||||||| | ||| | ||| |||||||||||| Sbjct 14699 GGAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAACCCCGAGGTAATGATTAATA 14642 Query 196 GGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAG 255 |||| || ||||| | ||||| || ||||||||||||||||||| | ||| Sbjct 14641 GGGACAGATGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCTTGGATCTTCGCAAG 14582 Query 256 ACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAG 315 | || |||||||| || |||| |||||||||||||||| |||||||||||||| Sbjct 14581 ATGGACAGGAGCGAAAGCATTTGCCAAAAATGTTTTCATTAATCA-TGAACGAAAGTTAG 14523 Query 316 GGG 318 || Sbjct 14522 AGG 14520 >seq217 Length=10616 Score = 149 bits (164), Expect = 1e-33 Identities = 206/283 (73%), Gaps = 19/283 (7%) Strand=Plus/Plus Query 36 CGCA-TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAG 94 |||| ||| |||| ||| |||| || | ||| | || ||||||||||| ||||| ||| Sbjct 7421 CGCACTGCTCTTCGCTGAGTGTTGAGGTGGGCCGGTACGTTTACTTTGAACAAATTCGAG 7480 Query 95 TGTTCAAAGCAGGC---CTTTGCTCGAATACA-TTAGCATGGAATAATAGAATAGGACGT 150 || | ||||||||| ||| || ||||| || | |||||||||| ||||||||| Sbjct 7481 TGCTTAAAGCAGGCTATCTTCGCCTGAATATTCTTTGTATGGAATAATGGAATAGGAC-- 7538 Query 151 GCGGTTCTATTTTGTTGGTTTCTAGGACCGCCG---TAATGATTAATAGGGATAGTCGGG 207 |||||||||||||| | ||| | ||| |||||||||||||||| || ||| Sbjct 7539 -------TATTTTGTTGGTTT-TCGGAACCCCGAGGTAATGATTAATAGGGACAGATGGG 7590 Query 208 GGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGC 267 || | ||||| || ||||||||||||||||||| ||||| || || Sbjct 7591 GGCATTCGTATTGCGACGTTAGAGGTGAAATTCTTGGATCGTCGCAAGACGGACAGAAGC 7650 Query 268 GAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 |||||| || |||| |||||||||||||||| ||||| || Sbjct 7651 GAAAGCATTTGCCAAAAATGTTTTCATTAATCA-AGAACGCAA 7692 >seq672 Length=26248 Score = 95.1 bits (104), Expect = 2e-17 Identities = 110/143 (77%), Gaps = 9/143 (6%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG---CCTTTGCTCGAATA-CATTAGCA 129 ||| ||||||| ||||||||||| | |||||||| ||| || ||||| | ||| Sbjct 8518 TTTGCTTTGAACAAATTAGAGTGCTTAAAGCAGGCTACCTACGCCTGAATATTCTGTGCA 8577 Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA---CCGCCGTAA 186 |||||||| ||||| ||| | |||||||||||||||| ||| | ||| ||| |||| Sbjct 8578 CGGAATAATGGAATAAGACCT-CGGTTCTATTTTGTTGATTT-TCGGAACCCCGAAGTAA 8635 Query 187 TGATTAATAGGGATAGTCGGGGG 209 ||||||||||| | || ||||| Sbjct 8636 TGATTAATAGGAACAGATGGGGG 8658 >seq1592 Length=9461 Score = 77.0 bits (84), Expect = 6e-12 Identities = 118/161 (73%), Gaps = 12/161 (7%) Strand=Plus/Minus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| |||| ||| |||| | || ||| | | |||||||||| |||||| | || | Sbjct 7056 TGCTCTTCGCTGAGTGT-CGAGGTAGCTGGTATGATTACTTTGAACAAATTAAAATGCTT 6998 Query 100 AAAGCAGGC---CTTTGC--TCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154 ||||||||| ||| || | | || | || ||||||||||| ||||||||| | || Sbjct 6997 AAAGCAGGCTACCTTCGCCTTTGTATTCTGTA-CATGGAATAATGGAATAGGACCT-CGA 6940 Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCG---TAATGATTA 192 |||||||||||| |||| | ||| | ||| ||||| ||| Sbjct 6939 TTCTATTTTGTT-GTTTTTTGGAGCCCCGAGATAATGGTTA 6900 >seq377 Length=24110 Score = 75.2 bits (82), Expect = 2e-11 Identities = 94/124 (76%), Gaps = 5/124 (4%) Strand=Plus/Minus Query 44 CTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAG 103 |||| ||| || | || | ||| | || | || |||||| ||||||||||| | |||| Sbjct 10267 CTTCGCTGAGTATCGAGGTGGGCCGGTACGTCTATTTTGAACAAATTAGAGTGCTTAAAG 10208 Query 104 CAGGC-CTTTGCTCG--AATA-CATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTA 159 ||||| ||| | || |||| | |||||||||||| ||||||||| | |||||||| Sbjct 10207 CAGGCTATTTTCGCGTTAATATTCTGTGCATGGAATAATGGAATAGGACCT-CGGTTCTA 10149 Query 160 TTTT 163 |||| Sbjct 10148 TTTT 10145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915142653568