Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2364 136 2e-29 seq1665 136 2e-29 seq62 136 2e-29 seq1509 127 9e-27 seq377 127 9e-27 seq351 127 9e-27 seq615 125 3e-26 seq714 120 1e-24 seq2644 116 2e-23 seq923 116 2e-23 seq2242 111 7e-22 seq1731 100 1e-18 seq858 100 1e-18 >seq2364 Length=2989 Score = 136 bits (150), Expect = 2e-29 Identities = 118/144 (82%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || |||||| |||| |||| |||||| | | ||||| ||||||| Sbjct 205 GAGTCGGGTTGCTTGAGAGTGCAGCCCTAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 264 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 || | ||| ||||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 265 AT-GACCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAA 323 Query 159 AAGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||||| Sbjct 324 GAGAGAGTTCAAGAGTACGTGAAA 347 Score = 136 bits (150), Expect = 2e-29 Identities = 108/130 (83%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||||||||||||||||||||||||||| ||| |||| ||| Sbjct 1020 AGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGACGAAGTCAGG 1079 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| |||||| || |||| ||||| ||||||||||||||||| | ||||| Sbjct 1080 GGAAACCCTGATGGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGT 1139 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 1140 ATAGGGGCGA 1149 Score = 78.8 bits (86), Expect = 4e-12 Identities = 68/84 (81%), Gaps = 3/84 (4%) Strand=Plus/Plus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGG---TGTCAA 464 ||||||||| |||||||||||||||||||||||| || |||||| ||||| || || Sbjct 838 CCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTACGCGAGTCATTGGGATTTGATAA 897 Query 465 ACCCGTGCGCGTAATGAAAGTGAA 488 ||| ||| |||||||||||| Sbjct 898 ACCTAAAGGCGAAATGAAAGTGAA 921 >seq1665 Length=370 Score = 136 bits (150), Expect = 2e-29 Identities = 118/144 (82%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || |||||| |||| |||| |||||| | | ||||| ||||||| Sbjct 252 GAGTCGGGTTGCTTGAGAGTGCAGCCCTAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 193 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 || | ||| ||||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 192 AT-GACCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAA 134 Query 159 AAGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||||| Sbjct 133 GAGAGAGTTCAAGAGTACGTGAAA 110 >seq62 Length=26906 Score = 136 bits (150), Expect = 2e-29 Identities = 108/130 (83%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 |||||||| |||| ||||||||||||||||||||||||||| ||| |||| ||| Sbjct 1536 AGAGCATACACGTTGCGACCCGAAAGATGGTGAACTATGCCTGGTCAGGACGAAGTCAGG 1595 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| |||||| || |||| ||||| ||||||||||||||||| | ||||| Sbjct 1596 GGAAACCCTGATGGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGT 1655 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 1656 ATAGGGGCGA 1665 Score = 122 bits (134), Expect = 4e-25 Identities = 115/144 (80%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || |||||| |||| |||| |||||| | | | ||| ||| ||| Sbjct 714 GAGTCGGGTTGCTTGAGAGTGCAGCCCTAAGTGGGTGGTAAACTCCATTTAAGGCTCAAT 773 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 || | ||| ||||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 774 AT-GACCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAA 832 Query 159 AAGAGAGTTAAAAAGCACGTGAAA 182 ||||| || || || |||||||| Sbjct 833 GAGAGATTTCAAGAGTACGTGAAA 856 >seq1509 Length=8547 Score = 127 bits (140), Expect = 9e-27 Identities = 106/130 (82%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || ||||||||||||| |||||||||||||||||| ||| |||| ||| Sbjct 8213 AGAGCGTACACGTTGGGACCCGAAGGATGGTGAACTATGCCTGGTCAGGACGAAGTCAGG 8272 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| |||||| || |||| || || ||||||||||||||||| | ||||| Sbjct 8273 GGAAACCCTGATGGAGGTCCGTAGCGATTATGACGTGCAAATCGATCGTCCGAACTGGGT 8332 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 8333 ATAGGGGCGA 8342 >seq377 Length=24110 Score = 127 bits (140), Expect = 9e-27 Identities = 116/144 (81%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| || || |||||||||||||||| |||||| | | ||||| ||||||| Sbjct 1871 GAGTCGGGTTGCTTAAGAGTGCAGCTCTAAATGGGTGGTAAACTCCATCTAAGGCTAAAT 1812 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 || | ||| ||||||||||||| |||||| |||| ||||| ||||||| |||| | | Sbjct 1811 AT-GACCACGAGACCGATAGCGAACAAGTGCCGTGAGGGAAAGTTGAAAAGAACTTCGAA 1753 Query 159 AAGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || ||| |||| Sbjct 1752 GAGAGAGTTCAAGAGTACGCGAAA 1729 >seq351 Length=1679 Score = 127 bits (140), Expect = 9e-27 Identities = 116/144 (81%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| || || |||||||||||||||| |||||| | | ||||| ||||||| Sbjct 350 GAGTCGGGTTGCTTAAGAGTGCAGCTCTAAATGGGTGGTAAACTCCATCTAAGGCTAAAT 291 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 || | ||| ||||||||||||| |||||| |||| ||||| ||||||| |||| | | Sbjct 290 AT-GACCACGAGACCGATAGCGAACAAGTGCCGTGAGGGAAAGTTGAAAAGAACTTCGAA 232 Query 159 AAGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || ||| |||| Sbjct 231 GAGAGAGTTCAAGAGTACGCGAAA 208 >seq615 Length=1953 Score = 125 bits (138), Expect = 3e-26 Identities = 99/119 (83%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 |||||| ||||||||||||||||||||||||| ||| |||| ||| ||||| ||| Sbjct 130 GTTGGGTCCCGAAAGATGGTGAACTATGCCTGGTCAGGACGAAGTCAGGGGAAAACCTGA 71 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||| || |||| ||||| |||||||||||||||| || ||||||||||||||| Sbjct 70 TGGAGGTCCGTAGCGATTCTGAAGTGCAAATCGATCGTCGGATCTGGGTATAGGGGCGA 12 >seq714 Length=22121 Score = 120 bits (132), Expect = 1e-24 Identities = 98/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 |||||| ||||||||||||||||||||||||| ||| |||| ||| ||||| ||| Sbjct 6039 GTTGGGTCCCGAAAGATGGTGAACTATGCCTGGTCAGGACGAAGTCAGGGGAAAACCTGA 6098 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||| || |||| ||||| |||||||||||||||| || ||||||||||||||| Sbjct 6099 TGGAGATCCGTAGCGATTCTGATGTGCAAATCGATCGTCGGATCTGGGTATAGGGGCGA 6157 >seq2644 Length=3693 Score = 116 bits (128), Expect = 2e-23 Identities = 97/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 ||||| ||||||||||||| |||| |||| || ||| |||| ||||| |||||||| Sbjct 3044 GTTGGAACCCGAAAGATGGGGAACAATGCTTGGTCAGGACGAAGTCAGAGCAAACTCTGA 2985 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | |||| || |||| ||||| ||||||||||||||||| | ||||||||||||||| Sbjct 2984 TAGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGTATAGGGGCGA 2926 >seq923 Length=39420 Score = 116 bits (128), Expect = 2e-23 Identities = 97/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 |||||||||||||| ||||||||||||||||| ||| |||| ||| |||||| ||| Sbjct 2399 GTTGGGACCCGAAATATGGTGAACTATGCCTGGTCAGGACGAAGTCAGGGGAAACCCTGA 2458 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||| ||||||| ||||| || ||||||||||| | || ||||||||| |||| Sbjct 2459 TGGAGGTCCGCAGCGATTCTGATGTCCAAATCGATCGCCGAAACTGGGTATAGTAGCGA 2517 Score = 78.8 bits (86), Expect = 4e-12 Identities = 73/90 (81%), Gaps = 2/90 (2%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||| | |||| ||| || |||||| |||| |||| | |||| | | ||||| ||||||| Sbjct 1156 GAGTTGGGTTGCTTGAGAGTGCAGCCCTAAGTGGGTGATAAACTCCATCTAAGGCTAAAT 1215 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTA 128 || | ||| ||||||||||||| ||||||| Sbjct 1216 AT-GACCACGAGACCGATAGCGAACAAGTA 1244 >seq2242 Length=476 Score = 111 bits (122), Expect = 7e-22 Identities = 99/124 (80%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 59 TGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAG 118 |||||| |||| | || |||||| | | ||||| ||||||||| | ||||||||||| Sbjct 1 TGCAGCCCTAAGTTGGTGGTAAACTCCATCTAAGGCTAAATATGACCTCGAGACCGATAG 60 Query 119 CGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGT 178 || ||||||| |||| ||||| ||||||| |||||| | |||||||| || || |||| Sbjct 61 CGAACAAGTATCGTGAGGGAAAGTTGAAAAGAACTTTGAAGAGAGAGTTCAAGAGTACGT 120 Query 179 GAAA 182 |||| Sbjct 121 GAAA 124 >seq1731 Length=338 Score = 100 bits (110), Expect = 1e-18 Identities = 99/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || ||||||||||||||||| |||||||||| | | ||| ||| ||| Sbjct 9 AGAGCGTACACGTTGGGACCCGAAAGATAGTGAACTATGTCAGGTCAGGACGAAATCAGG 68 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| ||||| || |||| ||||| ||||||||||| | ||| | ||||| Sbjct 69 GGAAACCCTGACGGAGGTCCGTAGCGATTCTGACGTGCAAATCGTTGGTCGGAACTGGGT 128 Query 674 ATAGGGGC 681 |||||||| Sbjct 129 ATAGGGGC 136 >seq858 Length=20491 Score = 100 bits (110), Expect = 1e-18 Identities = 93/118 (79%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 || ||||||||||||||||||||||| || | | ||| ||| |||||| ||| | Sbjct 8123 TTTGGACCCGAAAGATGGTGAACTATATCTTGTCAAGACGAAATCAGGGGAAACCCTGAT 8064 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||| ||||||| ||||| ||||||||||||||||| | ||| ||||||| ||| Sbjct 8063 GGAGGTCCGCAGCGATTCTGACGTGCAAATCGATCGTCGGAGCTGGATATAGGGACGA 8006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079865594300