Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1117 196 8e-48 seq1413 179 6e-43 seq377 176 7e-42 seq378 172 9e-41 seq1592 149 1e-33 seq217 140 5e-31 >seq1117 Length=638 Score = 196 bits (216), Expect = 8e-48 Identities = 217/295 (74%), Gaps = 52/295 (18%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 418 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 359 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG---------------- 115 | |||| || | | || ||||| | |||||||||||||| Sbjct 358 C-TCAATCT-CGTGCGACTAGAAGCTGCTTGTCCCTCTAAGAAGAATTGTTTGTATGTTG 301 Query 116 -------------------CC--AGCCA--------CCA---ACCATAGTCGATGGGGCT 143 || ||||| | | |||||| | | | || Sbjct 300 GTAGTAAAAACCTCACCGGCCGAAGCCAGGGGCCTTCGAGATACCATAATTTACGT--CT 243 Query 144 ATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAAC 203 ||||| |||| || |||||||||||||||||||||||| ||||||||| |||||||||| Sbjct 242 ATTTAACAGGCTAGAGTCTCGTTCGTTATCGGAATTAACTAGACAAATCGCTCCACCAAC 183 Query 204 TAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 182 TAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTATCAATCTGTC 128 >seq1413 Length=13777 Score = 179 bits (198), Expect = 6e-43 Identities = 110/117 (94%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||||||| |||| || |||||||||||||||||||||||||||||||||| |||||||| Sbjct 2624 CTATTTAACAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCA 2683 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 2684 ACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTATCAATCTGTC 2740 Score = 109 bits (120), Expect = 9e-22 Identities = 88/104 (85%), Gaps = 2/104 (2%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct 2424 TCCTTCAGTGTAGCGTGCGTGCGGCCCAGAACATCTAAGGGCATCGCAGACCTGTTATTG 2483 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 |||| | || | || |||||| | |||||||||||||| Sbjct 2484 -TTCAATC-TCGTGCGACTAGAAGCCGCTTGTCCCTCTAAGAAG 2525 >seq377 Length=24110 Score = 176 bits (194), Expect = 7e-42 Identities = 109/117 (93%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||||||| |||| || |||||||||||||||||||||||| ||||||||| |||||||| Sbjct 9531 CTATTTAACAGGCTAGAGTCTCGTTCGTTATCGGAATTAACTAGACAAATCGCTCCACCA 9590 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 9591 ACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTATCAATCTGTC 9647 Score = 118 bits (130), Expect = 2e-24 Identities = 90/104 (87%), Gaps = 2/104 (2%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9347 TCCTTCGGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 9406 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||||| | || | || |||||| | |||||||||||||| Sbjct 9407 -CTCAATC-TCGTGCGACTAGAAGCCGCTTGTCCCTCTAAGAAG 9448 >seq378 Length=21700 Score = 172 bits (190), Expect = 9e-41 Identities = 212/296 (72%), Gaps = 54/296 (18%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct 3512 TCCTTCAGTGTAGCGCGCGTGCGGCCCAAAACATCTAAGGGCATCACAGACCTGTTTTTG 3453 Query 72 CCTCAAACTTCCATTGG-CTGGAAGCCAATAGTCCCTCTAAGAAG--------------- 115 | |||| || ||| | || |||||| | |||||||||||||| Sbjct 3452 C-TCAATCT--CATGCGACTAGAAGCCGTTTGTCCCTCTAAGAAGATTTATTTGTACGTT 3396 Query 116 -----------CCAGCCACCAACCATAG----------TCGA------------TGGGGC 142 ||| |||| ||| || |||| | | Sbjct 3395 GGTAGTAAAAACCA--CACCGACCGAAGCGGGGGGCCTTCGAGATACCACGATTTACGTG 3338 Query 143 TATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAA 202 |||||| | | || |||||||||||||| ||||||| ||||||||||| ||||||||| Sbjct 3337 TATTTAACCCGCTAGAGTCTCGTTCGTTATAGGAATTAGCCAGACAAATCGCTCCACCAA 3278 Query 203 CTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 || ||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct 3277 CTGAGAACGGCCATGCACCACCACTCACCGAATCAAGAAAGAGCTATCAATCTGTC 3222 >seq1592 Length=9461 Score = 149 bits (164), Expect = 1e-33 Identities = 202/289 (70%), Gaps = 47/289 (16%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct 6210 TCAGTGTAGCACGCGTGCGGCCCAGAACATCTAAGGGCATCACAGATCTGTTATTGC-TC 6268 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG----------CC-------- 117 || || | | | | |||| | |||||||||||||| || Sbjct 6269 AATCTCCAAGCGTCAAAAAGCTGCTTGTCCCTCTAAGAAGATTTGATTGTCCGTTGGTAG 6328 Query 118 -----AGC-CACCAACCATAGTCGATGG----------------------GGCTATTTAG 149 | | |||| || || || || | || |||| Sbjct 6329 TTAAAACCACACCGGCCGAAGCCGGGGGCCTTCAAGATACCATAATTTACGTCTCTTTAA 6388 Query 150 CAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAA 209 |||| | |||||||| | ||||||||||||||||||||||| || |||||| |||||| Sbjct 6389 CAGGCCAGAGTCTCGTTGGCTATCGGAATTAACCAGACAAATCGCTGCACCAATTAAGAA 6448 Query 210 CGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 | ||||||||||||||||| |||||||||||||||||||||||| || Sbjct 6449 CTTCCATGCACCACCACCCAACGAATCAAGAAAGAGCTATCAATCTTTC 6497 >seq217 Length=10616 Score = 140 bits (154), Expect = 5e-31 Identities = 201/293 (69%), Gaps = 58/293 (20%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||| ||||||||||||| |||||||| || ||||||||||||||||||||||||| Sbjct 8190 TCCTTCAGCGTAGCGCGCGTGCAGCCCAGAATATTTAAGGGCATCACAGACCTGTTATTG 8131 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC-------------- 117 | |||| || | | || |||||| | |||||||||||||| Sbjct 8130 C-TCAATCT-CGTGCGACTAGAAGCCGCTTGTCCCTCTAAGAAGATTTGTTTGTACGTTG 8073 Query 118 ---------AGC-CACCAACCATAGTCGATGG----------------------GGCTAT 145 | | |||| ||| ||||| || | || | Sbjct 8072 GTAGTAAAAATCACACCGACCGAAGTCGGGGGTCTTCGAGACACCATAATTTACGTCTTT 8013 Query 146 TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTA 205 ||| |||| || |||||||||||||| ||||||||||||||||||| ||||||||| || Sbjct 8012 TTAACAGGCTAGAGTCTCGTTCGTTATTGGAATTAACCAGACAAATCGCTCCACCAAATA 7953 Query 206 AGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 | |||| ||||||||| ||||||||||||||||||||||||||| Sbjct 7952 ACAACGCCCATGCACC----------GAATCAAGAAAGAGCTATCAATCTGTC 7910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796751632746