Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq1413 87.8 1e-15 seq378 87.8 1e-15 seq1117 78.8 6e-13 seq377 78.8 6e-13 >seq1413 Length=13777 Score = 87.8 bits (96), Expect = 1e-15 Identities = 74/86 (86%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| ||||||||||| |||| ||||| Sbjct 2223 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTGCAAAG 2279 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||||| |||| Sbjct 2280 GGCAGGGACGTAAT-CAACGCGAGCT 2304 >seq378 Length=21700 Score = 87.8 bits (96), Expect = 1e-15 Identities = 74/86 (86%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| ||||||||||| |||||||||| Sbjct 3713 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 3657 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 ||||||||||| || |||||| |||| Sbjct 3656 GGCAGGGACGT-ATTCAACGCGAGCT 3632 >seq1117 Length=638 Score = 78.8 bits (86), Expect = 6e-13 Identities = 72/86 (84%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| || |||| || |||| |||| || |||||||| |||||||||| Sbjct 628 TCCGAA-GACCTCACTTAGTCATT-CAATCGGCAGTA-GCAACGGGCGGTGTGTACAAAG 572 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| ||| || |||| Sbjct 571 GGCAGGGACGTAAT-CAATGCGAGCT 547 >seq377 Length=24110 Score = 78.8 bits (86), Expect = 6e-13 Identities = 72/86 (84%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| || |||| || |||| |||| ||||||||||| ||||| |||| Sbjct 9147 TCCGAA-GACCTCACTTAGTCATT-CAATCGGCAGTA-GCGACGGGCGGTGTGTAAAAAG 9203 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| ||| || |||| Sbjct 9204 GGCAGGGACGTAAT-CAATGCGAGCT 9228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300782329880