Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq1538 82.4 9e-14 seq1413 82.4 9e-14 seq378 82.4 9e-14 >seq1538 Length=665 Score = 82.4 bits (90), Expect = 9e-14 Identities = 83/105 (79%), Gaps = 5/105 (5%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATG-TATTCGGGC 68 ||||||||||||||| || | ||||||||| |||||||||||| | ||||| ||| Sbjct 521 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACAGAATATTCAGGC 463 Query 69 GTA---AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | | |||||||||| | ||||||||||| |||| ||||| || Sbjct 462 GAAGATAGCCTGCTTTAAGCACTCTAATTTGTTCAAAGTAAACGT 418 >seq1413 Length=13777 Score = 82.4 bits (90), Expect = 9e-14 Identities = 83/105 (79%), Gaps = 5/105 (5%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATG-TATTCGGGC 68 ||||||||||||||| || | ||||||||| |||||||||||| | ||||| ||| Sbjct 3134 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACAGAATATTCAGGC 3192 Query 69 GTA---AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | | |||||||||| | ||||||||||| |||| ||||| || Sbjct 3193 GAAGATAGCCTGCTTTAAGCACTCTAATTTGTTCAAAGTAAACGT 3237 >seq378 Length=21700 Score = 82.4 bits (90), Expect = 9e-14 Identities = 83/105 (79%), Gaps = 5/105 (5%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATG-TATTCGGGC 68 ||||||||||||||| || | ||||||||| |||||||||||| | ||||| ||| Sbjct 2828 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACAGAATATTCAGGC 2770 Query 69 GTA---AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | | |||||||||| | ||||||||||| |||| ||||| || Sbjct 2769 GAAGATAGCCTGCTTTAAGCACTCTAATTTGTTCAAAGTAAACGT 2725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595163870244