Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1413 219 8e-55 seq378 214 3e-53 seq1117 205 2e-50 seq377 205 2e-50 seq217 188 1e-45 seq1592 159 7e-37 >seq1413 Length=13777 Score = 219 bits (242), Expect = 8e-55 Identities = 205/256 (80%), Gaps = 6/256 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||||| | || || || | |||| |||||||||||||| | Sbjct 2525 CTTCTTAGAGGGACAAGCGGCTTCTAGTCGCACGA-GATTGAA-CAATAACAGGTCTGCG 2468 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||||||||||||||| ||||||||||| || ||||| ||| Sbjct 2467 ATGCCCTTAGATGTTCTGGGCCGCACGCACGCTACACTGAAGGAATCAACGTGTTTT--- 2411 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 |||||| || |||||| |||||| | | || ||| ||||||| ||||| | | ||| Sbjct 2410 CCTTGGTCGAAAGGTCCGGGTAACCCGCTGAACCTCCTTCGTGCTAGGGATTGGGGCTTG 2351 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||||| | | | |||||||||| || ||||| |||| ||||| ||| |||||||||| Sbjct 2350 AAATTATTCCCCATGAACGAGGAATTCCCAGTAAACGCGAGTCATAAGCTCGCGTTGATT 2291 Query 311 ACGTCCCTGCCCTTTG 326 |||||||||||||||| Sbjct 2290 ACGTCCCTGCCCTTTG 2275 >seq378 Length=21700 Score = 214 bits (236), Expect = 3e-53 Identities = 206/259 (80%), Gaps = 8/259 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCG-ATGGAAGTTTGAGGCAATAACAGGTCTGT 129 |||||||||||||| | ||||| | || || ||| || ||||| ||| ||||||||||| Sbjct 3411 CTTCTTAGAGGGACAAACGGCTTCTAGTCGCATG--AGATTGAG-CAAAAACAGGTCTGT 3467 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATC 189 |||||||||||||||| |||||||||||||||||||||||| || ||||| ||| Sbjct 3468 GATGCCCTTAGATGTTTTGGGCCGCACGCGCGCTACACTGAAGGAATCAACGTGTTTT-- 3525 Query 190 ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 || |||||| |||||| |||||| | | || ||| |||| || ||||| | | || Sbjct 3526 -CCCTGGCCGAAAGGTCCGGGTAACCCGCTGAACCTCCTTCGTACTAGGGATTGGGGCTT 3584 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 | ||||||| | | | ||| |||||| | ||||| |||| ||||| ||| |||||||| Sbjct 3585 GAAATTATTCCCCATGAACAAGGAATTTCCAGTAAACGCGAGTCATAAGCTCGCGTTGAA 3644 Query 310 TACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||| Sbjct 3645 TACGTCCCTGCCCTTTGTA 3663 >seq1117 Length=638 Score = 205 bits (226), Expect = 2e-50 Identities = 212/269 (79%), Gaps = 19/269 (7%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | | ||| | || || || | ||||| |||||||||||||||| Sbjct 317 CTTCTTAGAGGGACAAGCAGCTTCTAGTCGCACGA-GATTGAG-CAATAACAGGTCTGTG 374 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||||||||||||||||||||||||||| || ||||| || | Sbjct 375 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAAGGAATCAACGTGT---TTT 431 Query 191 CCTTGGCCGGAAGGTCTGGGTAATC--TTGTTAAACTCTG--------TCGTGCTGGGGA 240 || |||||| |||||| |||||| | ||| | ||||| ||||||| |||| Sbjct 432 CCCTGGCCGAAAGGTCCGGGTAACCCGCTGTAACCCTCTGAACCTCCTTCGTGCTAGGGA 491 Query 241 -TAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGC 299 | |||| ||| ||||||| | | | |||||||||| || ||||| |||| | ||| ||| Sbjct 492 TTGGAGC-TTGAAATTATT-CCCGTGAACGAGGAATTCCCAGTAAACGCGAGGCATAAGC 549 Query 300 ACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||| |||||||||||||||||||||||| Sbjct 550 TCGCATTGATTACGTCCCTGCCCTTTGTA 578 >seq377 Length=24110 Score = 205 bits (226), Expect = 2e-50 Identities = 206/259 (80%), Gaps = 9/259 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||||| | || || || | ||||| |||||||||||||||| Sbjct 9448 CTTCTTAGAGGGACAAGCGGCTTCTAGTCGCACGA-GATTGAG-CAATAACAGGTCTGTG 9391 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 ||||||||||||||||||||||||||||||||||||| || || ||||| || | Sbjct 9390 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACCGAAGGAATCAACGTGT---TTT 9334 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGA-TAGAGCATT 249 || |||||| ||||| |||||| | | | || ||| ||||||| |||| | |||| || Sbjct 9333 CCCTGGCCGAGAGGTCCGGGTAACCCTCTGAACCTCCTTCGTGCTAGGGATTGGAGC-TT 9275 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 | ||||||| | | | ||| |||||| || |||| |||| | ||| ||| ||| ||||| Sbjct 9274 GAAATTATT-CCCGTGAACAAGGAATTCCCAGTATACGCGAGGCATAAGCTCGCATTGAT 9216 Query 310 TACGTCCCTGCCCTTTGTA 328 |||||||||||||||| || Sbjct 9215 TACGTCCCTGCCCTTTTTA 9197 >seq217 Length=10616 Score = 188 bits (208), Expect = 1e-45 Identities = 203/265 (77%), Gaps = 13/265 (5%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||||| | || || || | ||||| |||||||||||||||| Sbjct 8089 CTTCTTAGAGGGACAAGCGGCTTCTAGTCGCACGA-GATTGAG-CAATAACAGGTCTGTG 8146 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 ||||||||| || |||||||| ||||||||||||| |||| || ||||| || | Sbjct 8147 ATGCCCTTAAATATTCTGGGCTGCACGCGCGCTACGCTGAAGGAATCAACGTGT---TTT 8203 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || || ||| |||||| |||||| | | || ||| ||||||| ||||| | | ||| Sbjct 8204 CCCTGACCGAAAGGTCCGGGTAACCCGCTGAACCTCCTTCGTGCTAGGGATTGGGGCTTG 8263 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAG-------TAAGCGCGTGTCATCAGCACGC 303 ||||||| | | | |||||||||| || || ||| |||| ||||| || ||| Sbjct 8264 AAATTATTCCCCATGAACGAGGAATTCCCAGTAAACGCTAAACGCGAGTCATGAGGTCGC 8323 Query 304 GTTGATTACGTCCCTGCCCTTTGTA 328 ||||||||||| ||||||||||||| Sbjct 8324 GTTGATTACGTTCCTGCCCTTTGTA 8348 >seq1592 Length=9461 Score = 159 bits (176), Expect = 7e-37 Identities = 192/258 (74%), Gaps = 5/258 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCAA-GCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | | ||| | || | | || ||||| ||||||||| |||||| Sbjct 6308 CTTCTTAGAGGGACAAGCAGCTTTTTGACGCTTGGAGATTGAG-CAATAACAGATCTGTG 6250 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 ||||||||||||||||||||||||||||| |||||||||| | ||||| || | Sbjct 6249 ATGCCCTTAGATGTTCTGGGCCGCACGCGTGCTACACTGAAGAAATCAACGTGT---TTT 6193 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || |||||| |||||| | | || | || | | ||||||| | || | | ||| Sbjct 6192 CCCTGGCCGAAAGGTCCGAGCAACACACTGAACCGCCTTCGTGCTACGAATTGGGGCTTG 6133 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||| || || | |||||||||| || ||||| || | |||| ||| |||||| ||| Sbjct 6132 AAATTGTTCGTCATGAACGAGGAATTCCCAGTAAACGTGAGTCAAAAGCTCGCGTTAATT 6073 Query 311 ACGTCCCTGCCCTTTGTA 328 || |||| ||| |||||| Sbjct 6072 ACTTCCCAGCCATTTGTA 6055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947140648448