Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq305 100 2e-16
>seq305
Length=1407860
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 61161 TGACTGGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTT 61220
||| ||||| ||||| | |||| | |||||||| ||||| || || || ||
Sbjct 686867 TGATTGGGATCGTTTGACTTCTAGTGAGAAGCATTTCATATCTCATGTATTAGCATTTTT 686808
Query 61221 TGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCA 61280
||| || || || || || |||||||| ||| | | ||||| || ||||| || ||
Sbjct 686807 TGCAGCCTCTGATGGAATTGTCAATGAAAATCTTGTTGAACGATTTAGTCAGGAAGTACA 686748
Query 61281 AGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGA 61340
| | ||||| ||||||||||| |||||||| | || ||||| ||||| || || ||
Sbjct 686747 GATAACAGAGGCACGTTGTTTCTATGGCTTCCAAGTAGCTATGGAAAATGTGCATTCAGA 686688
Query 61341 GATGTACAGTGTTCTCATCGATACGTACAT 61370
|||||| | | || |||||||||||
Sbjct 686687 AATGTACTCATTATTAATTGATACGTACAT 686658
Score = 98.7 bits (108), Expect = 8e-16
Identities = 134/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 61435 AAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTG 61494
||||| ||||||| || |||||||| | | | ||| ||||| || |||||| |
Sbjct 686508 AAAGCTAATTGGGCATTGAATTGGATAAACCATGAAACCGCTACTTTCCCTGAACGTGTA 686449
Query 61495 CTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGG 61554
| |||||||| | || || ||| | || |||||||| ||||| || || || |||
Sbjct 686448 GTCGCATTTGCCGCAGTAGAAGGTATTTTCTTCAGTGGTAGCTTTGCTGCCATTTTCTGG 686389
Query 61555 TTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGAC 61614
|| ||||| | ||||||||||| || || || ||||||||||| | || || | ||
Sbjct 686388 TTAAAGAAGAGAGGACTTATGCCAGGACTTACGTTCAGCAATGAACTTATTTCTAGGGAT 686329
Query 61615 GAGGGCA 61621
|||| ||
Sbjct 686328 GAGGTCA 686322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397537638974240
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |