Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= NC_033778.1 Length=111453 Score E Sequences producing significant alignments: (Bits) Value seq665 123 2e-23 >seq665 Length=2298905 Score = 123 bits (136), Expect = 2e-23 Identities = 160/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 26029 ACATTTGAAACATGGCCAAAAGCAATGATGCGAATTAAAGAACAACTTTCAAATGCGGGt 26088 ||||| ||||||||||||||| | ||| | | ||||||||| | || |||| ||| Sbjct 183038 ACATTCGAAACATGGCCAAAATCTATGCCACAGACAAAAGAACAATTAGCAGATGCTGGT 182979 Query 26089 tttttttATTCAGGAAATGGAGATAAAGTATTATGTTATCAATGTGGTGGTTCTATAAAT 26148 |||| |||| || || || || || ||||||||||| ||||| ||| |||| Sbjct 182978 TTTTATTATATTGGTAAAGGTGACCAAACCTTATGTTATCACTGTGGAGGTGGCTTAAAG 182919 Query 26149 AATTTTGAATTACATGACGATCCATGGATACGACATGCAAAAGAATATCCAAATTGTTTA 26208 ||| ||| | | || ||||||||| || |||||||||| | | | || |||| Sbjct 182918 GATTGGGAACCAGAAGATGATCCATGGGAACAACATGCAAAATGGTTTTCTAAGTGTTAT 182859 Query 26209 TATGTATTTCTTGTTAAAGGACAAGATTATATAAATAGAAT 26249 ||| |||| | ||| |||||||||||||| |||||| ||| Sbjct 182858 TATTTATTAATGGTTCAAGGACAAGATTATGTAAATAAAAT 182818 Score = 122 bits (134), Expect = 6e-23 Identities = 124/162 (77%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 26370 TGATGATGGTAGAATATGTAAAATTTGTTATAATGAAGAAATCGGTGTTGTATTTTTACC 26429 |||||||| || || ||||||||||||||||||| |||| | || || |||||| |||| Sbjct 182455 TGATGATGCAAGGATGTGTAAAATTTGTTATAATGGAGAATTAGGAGTGGTATTTCTACC 182396 Query 26430 GTGTGGTCATATTGTAGCATGTATTAAATGTGCACCCGGAATGATGAATTGTCCAGTCTG 26489 ||||| ||||| || || ||| |||| ||||| || ||||||| | |||| |||| || Sbjct 182395 ATGTGGACATATAGTTGCTTGTGTTAAGTGTGCTCCTGGAATGACAACTTGTGCAGTATG 182336 Query 26490 TCGTAAACCAGTCAGCATGAATATACGAACATTCTTTTCATA 26531 | | | || || | |||| | | ||| | ||||| ||||| Sbjct 182335 TAGAGAGCCTGTTACTATGACTGTGCGAGCCTTCTTCTCATA 182294 Score = 107 bits (118), Expect = 1e-18 Identities = 135/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 25606 GCTGGATTGTATTATATTGGTGAAAATGATAGTGTTAAATGTTTTGAATGTAACGTTACT 25665 |||||||| ||||||| |||||| ||||| || | |||||||||||| | | | Sbjct 183416 GCTGGATTTTATTATACAGGTGAAGGTGATAAAGTAAGGTGTTTTGAATGTCAAG-TGGA 183358 Query 25666 ATTATG-AAATGGGAAGAAGATGATGAACCTTTAGCATGTCATAAAAGATGGTCTGCAAG 25724 | |||| |||||| ||||| |||| | ||| | | |||| || | ||||| ||||| Sbjct 183357 AATATGCCAATGGGTAGAAGGTGATAACCCTATGGTTGATCATCAACGTTGGTCAGCAAG 183298 Query 25725 ATGTCGATTTATTAGAAAAATTGCTTGTGGAAATGTTCCAATAGGTATTGATCCAAATAC 25784 ||| |||||||| | ||||| |||||| ||||| ||||| || | ||||| | ||| Sbjct 183297 GTGTAGATTTATTCGTAAAATGCATTGTGGTAATGTACCAATTGGAGTAGATCCCAGTAC 183238 Query 25785 AGT 25787 ||| Sbjct 183237 AGT 183235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356497573315164