Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq63732 138 2e-30 >seq63732 Length=9904 Score = 138 bits (152), Expect = 2e-30 Identities = 199/276 (72%), Gaps = 25/276 (9%) Strand=Plus/Plus Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC-------------TT 111 ||| | ||| |||||||||| |||||| |||| | ||||||||| || Sbjct 1883 GCCGGTACTATTACTTTGAACAAATTAAAGTGCTTAAAGCAGGCTCAATTTAAAGAAATT 1942 Query 112 T-----GCTCGAATACATTA-GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTG- 164 | || ||||| ||| |||||||||||| ||||||||| | | |||||| ||| Sbjct 1943 TAAAACGCCTGAATATATTTTGCATGGAATAATGGAATAGGACCT-CTGTTCTACTTTCA 2001 Query 165 TTGGTTTCTAGGACC--GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAA 222 ||||||| ||| ||| | |||||||||||||| ||| ||||| | |||||| Sbjct 2002 TTGGTTTTTAG-ACCAAGAGGTAATGATTAATAGAAGCAGTTGGGGGCATTAGTATTACG 2060 Query 223 TTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAA 282 | ||||||||||||| | || |||||||||| |||||||| || |||| Sbjct 2061 AGGCGAGAGGTGAAATTCGTAGACCCTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAA 2120 Query 283 GGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||||||||||||| ||||||||||||| || Sbjct 2121 GGATGTTTTCATTAATCA-AGAACGAAAGTTAGAGG 2155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914089139392