Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq63732 167 4e-39 >seq63732 Length=9904 Score = 167 bits (184), Expect = 4e-39 Identities = 97/100 (97%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 2502 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACGAACTAAGAACGGCCATGC 2443 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||| || ||||||||||||||||||||| Sbjct 2442 ACCACCACCCATAGATTCGAGAAAGAGCTATCAATCTGTC 2403 Score = 96.9 bits (106), Expect = 6e-18 Identities = 87/106 (82%), Gaps = 5/106 (5%) Strand=Plus/Minus Query 13 CCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 || ||| |||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct 2758 CCTTCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG- 2700 Query 73 CTCAAACTTCCATT--GGCTGGAAGCCAATAGTCCCTCTAAGAAGC 116 ||||| || |||| ||| || || | |||| | |||||||| Sbjct 2699 CTCAATCT--CATTAATGCTAGACGCATTTTGTCCATTTAAGAAGC 2656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795863075499