Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq63732 178 4e-42 seq10768 145 2e-32 seq67053 116 1e-23 >seq63732 Length=9904 Score = 178 bits (196), Expect = 4e-42 Identities = 146/177 (82%), Gaps = 7/177 (4%) Strand=Plus/Minus Query 188 TAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-----CCGAAACGG--CTCC 240 |||||||| |||| ||||| |||||||||||||| | ||| |||||| |||| Sbjct 8054 TAAGTAAAGAAACAATAAGAGTAGTGGTATTTCATTGGCGATAAACCGAAATTTATCTCC 7995 Query 241 CACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGG 300 ||||||| |||||||||| | ||| | |||| | | ||||||||||||||||||||| Sbjct 7994 CACTTATGCTACACCTCTTATGTCTCCTTACAATGCCAAACTAGAGTCAAGCTCAACAGG 7935 Query 301 GTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 |||||||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct 7934 GTCTTCTTTCCCCGCTAATGATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 7878 >seq10768 Length=2995 Score = 145 bits (160), Expect = 2e-32 Identities = 92/100 (92%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 436 TAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGA 495 |||||| |||| ||||||||||||||||||| | ||| | |||| |||||||||||||| Sbjct 657 TAAGAGTGTCAAAGTTACTCCCGCCGTTTACGCTCGCCTACTTGATTTTCTTCACTTTGA 716 Query 496 CATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||||||||||||||||||||| Sbjct 717 CATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 756 Score = 127 bits (140), Expect = 7e-27 Identities = 90/102 (88%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 436 TAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTT--CACTTT 493 |||||| |||| ||||||||||||||||||| | ||| | |||| ||| || |||||| Sbjct 1557 TAAGAGTGTCAAAGTTACTCCCGCCGTTTACGCTCGCCTACTTGATTTTTTTTTCACTTT 1616 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||| ||||||||||||||||||||||||||||||||| Sbjct 1617 GACATTCACAGCACTGGGCAGAAATCACATTGCGTCAACATC 1658 >seq67053 Length=1604 Score = 116 bits (128), Expect = 1e-23 Identities = 86/99 (87%), Gaps = 1/99 (1%) Strand=Plus/Plus Query 436 TAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGA 495 || ||||||||||||| | |||| | |||||| |||||| |||||||||||||| || | Sbjct 1354 TATGAGAGTCATAGTTGC-CCCGGCTTTTACCAGCGCTTACTTGAATTTCTTCACGTTTA 1412 Query 496 CATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACAT 534 ||||||||||||| ||||||||||| |||| |||||||| Sbjct 1413 CATTCAGAGCACTAGGCAGAAATCATATTGTGTCAACAT 1451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1633215210592