Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq63732 407 4e-111 >seq63732 Length=9904 Score = 407 bits (450), Expect = 4e-111 Identities = 412/529 (78%), Gaps = 27/529 (5%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAA---GAGCCCTGTATCAGTATTTATTGTCACTA 57 |||||||||||||||||| | || | ||| ||||||| ||||| | ||||||| Sbjct 1230 GTACTCATTCCAATTACAGGGCCTCGGATGCGAGTCCTGTATTGTTATTTTTCGTCACTA 1171 Query 58 CCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCC 117 |||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||| Sbjct 1170 CCTCCCCGTGCTGGGAGTGGGTAATTTACGCGCCTGCTGCCTTCCTTAGATGTGGTAGCC 1111 Query 118 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATG 177 ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct 1110 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTGCAACCATG 1051 Query 178 GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 |||| || |||| |||||||| | ||||||||||||||| |||||||||| ||| || Sbjct 1050 GTAGTCCTCTATACTACCATCAATAGTTGATAGGGCAGACATTTGAATGATATGTCGTCG 991 Query 238 GCTCAAGGCCATGCGATTCGTTA-AGTTATTATGAATCACC----AAGGAGCC-CCGAAG 291 | | || |||| |||| | | | |||| || ||| | | | | || ||||| Sbjct 990 GTACGAGACCATACGATCAGCCATAATTATCCAGATTCATCTAAAATGTATCCACCGAAA 931 Query 292 GGCGTTGGTTTTTTATCTAATAAATACAC--------CCCTT---CCG--AAGTCGGGGT 338 | || | |||| |||||||||| ||| || || || | | || Sbjct 930 TGGATTTGGTTTTAATCTAATAAAAGCACATGTGTCACCGTTTGCACGGTGATTTCATGT 871 Query 339 TTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA---GTAAGGTACTATC 395 | || ||||||||||||||| |||||||||| |||||||| ||| || | || ||| Sbjct 870 TGTTTGCATGTATTAGCTCTGGAATTACCACAGTTATCCAAGTAACTGT-ATTTATAATC 812 Query 396 AAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATAC 455 ||||||| ||| ||| | || |||||| || || |||||||| || | || | || ||| Sbjct 811 AAATAAATAATAGCTGTTGTACTGAGCCTTTTGCGGTTTCACTATAGA-ATAGTTTGTAC 753 Query 456 TTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 752 TTAGACATGCATGGCTTAATCTTTGAGACAAGCATATAACTACTGGCAG 704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1508566691584