Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq43850 86.0 2e-11 >seq43850 Length=9081 Score = 86.0 bits (94), Expect = 2e-11 Identities = 109/148 (74%), Gaps = 4/148 (3%) Strand=Plus/Minus Query 364424 CCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCG 364483 ||||| ||||||||||| ||||| | | | ||||| |||||||| || || | ||| Sbjct 8208 CCAATTGTCATACGAGAAGGAATAGCGTGCGGGTTAATGATGATATCTGGAGTTAAGCCT 8149 Query 364484 TCAGCGGTAAAGGGCATATCTTC--GGGAGGAACGATGAGACCAATGGTTCCCTTTTGCG 364541 |||| || || ||||| ||||| | | | || | |||| ||||||||||| Sbjct 8148 TCAGATGTGAAAGGCATGTCTTCCTGCCTGTATTGA--ATACCACATGTTCCCTTTTGTC 8091 Query 364542 CATAGCGAGAAGCAAACTTGTCGCCAAT 364569 ||| ||||||||||||||||| ||||| Sbjct 8090 CATGCCGAGAAGCAAACTTGTCTCCAAT 8063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1881955084162447