Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_033034.1 Length=13000 Score E Sequences producing significant alignments: (Bits) Value seq64892 100 2e-17 >seq64892 Length=10189 Score = 100 bits (110), Expect = 2e-17 Identities = 131/182 (72%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 8709 GGATTGATTATAAATAGAGATGAAACAATGCAAAGTGCTGATTACCTGAATTATGGCAAG 8768 |||||||| || | || ||| ||||| ||||||||||||||||| || |||||||| || Sbjct 1690 GGATTGATCATCATTAAAGACGAAACTATGCAAAGTGCTGATTATCTAAATTATGGGAAA 1631 Query 8769 ATTCCCTTCTTTAGGGGGAATTTGAGAAATCTTGAAACCAAACGATGGTCTAGAGTCACT 8828 ||| | |||| | ||||||| | ||||| | || || ||||||| |||| | Sbjct 1630 ATTTCTATCTTCACGGGGAATCTAAGAAACTTGGAGAC------ATGGTCTTGAGTATCA 1577 Query 8829 TGCGTCACCAATGATCAAATTCCAACTTTGGCAAACGTGATGTCTTCAGTTACAACAAAT 8888 || || || ||||| | |||| | | |||| | | ||| | |||||||||||| Sbjct 1576 TGTACAACAAACGATCAGTTATCAACCCTTGGAAACATTACGTCAACTGTTACAACAAAT 1517 Query 8889 GC 8890 || Sbjct 1516 GC 1515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 41428151935184