Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26] 231,041 sequences; 489,347,612 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq189887 154 2e-35 seq58364 114 2e-23 seq58171 96.9 5e-18 >seq189887 Length=762 Score = 154 bits (170), Expect = 2e-35 Identities = 179/229 (78%), Gaps = 13/229 (6%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||| || ||||||| | |||||| |||||| | Sbjct 486 GTACAAAGGGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAATT-C 429 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGAT 118 | ||| | | |||| || || | | ||||| | || || || | |||| | | Sbjct 428 CAGGTTCATGTG-AACAGTTTCAGTTCACAATCCCAAGCAAGA--AAGTGGTTCAGCGGT 372 Query 119 T-ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176 | |||||||||| |||| | ||| ||| || ||||| ||| | || |||||||||||| Sbjct 371 TTACCCGGACCTCTCGGTCTAGGAAATACAC--GTTGA-TACTTTCATTGTAGCGCGCGT 315 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 || |||||| |||||||||||||||||||||||||||||| ||||| || Sbjct 314 GCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 267 >seq58364 Length=270 Score = 114 bits (126), Expect = 2e-23 Identities = 150/197 (76%), Gaps = 12/197 (6%) Strand=Plus/Minus Query 33 TTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTAT 92 || ||||||| | |||||| |||||| || ||| | | |||| || || | | || Sbjct 268 TTAATGACTCACACTTACTGGGAATT-CCAGGTTCATGTG-AACAGTTTCAGTTCACAAT 211 Query 93 CCCCATCACGATGAAAT--TTCAAAGATT-ACCCGGACCTGTCGGCCAAGGTGATAGACT 149 ||| | || || || | |||| | || |||||||||| |||| | ||| ||| || Sbjct 210 CCCAAGCAAGA--AAGTGGTTCAGCGGTTTACCCGGACCTCTCGGTCTAGGAAATACAC- 154 Query 150 CGTTGAATACAT-CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACC 208 ||||| ||| | || |||||||||||||| |||||| |||||||||||||||||||||| Sbjct 153 -GTTGA-TACTTTCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACC 96 Query 209 TGTTATTGCCTCAAACT 225 |||||||| ||||| || Sbjct 95 TGTTATTG-CTCAATCT 80 >seq58171 Length=266 Score = 96.9 bits (106), Expect = 5e-18 Identities = 85/101 (84%), Gaps = 5/101 (5%) Strand=Plus/Minus Query 126 ACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGTGCGGCCCA 184 |||| |||| | ||| ||| || ||||| ||| | || |||||||||||||| ||||| Sbjct 266 ACCTCTCGGTCTAGGAAATACAC--GTTGA-TACTTTCATTGTAGCGCGCGTGCAGCCCA 210 Query 185 GAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 | |||||||||||||||||||||||||||||| ||||| || Sbjct 209 GGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 750316866315