Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26] 231,041 sequences; 489,347,612 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq70288 152 9e-35 seq36873 80.6 5e-13 >seq70288 Length=330 Score = 152 bits (168), Expect = 9e-35 Identities = 188/250 (75%), Gaps = 8/250 (3%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT---TGCTCGAATACATTAGCATG 131 |||||||||| ||||||||||| | ||||||||| | ||| ||||| | ||||| Sbjct 255 TTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTTCAAATGCCTGAATATTTGTGCATG 196 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC-GCCGTAATGA 189 ||||||| ||||| ||| | | |||||| ||| ||||||| ||| | | ||||||| Sbjct 195 GAATAATGGAATAAGACCT-CTGTTCTACTTTCATTGGTTTATAGATCAAGAGGTAATGA 137 Query 190 TTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248 ||||||| ||| ||||| | |||||| | |||||||||||||||||| Sbjct 136 TTAATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCTTGGACCG 77 Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGA 308 |||||||||| |||||||| || |||| ||||||||||||||||| |||||| Sbjct 76 TCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AGAACGA 18 Query 309 AAGTTAGGGG 318 ||||||| || Sbjct 17 AAGTTAGAGG 8 >seq36873 Length=4163 Score = 80.6 bits (88), Expect = 5e-13 Identities = 175/249 (70%), Gaps = 21/249 (8%) Strand=Plus/Plus Query 79 TTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT---TTGCTCGAATACATTAGCATGGAAT 135 |||||| ||||||||||| | ||| ||||| | |||| ||||| | | ||||||| Sbjct 3828 TTTGAAGAAATTAGAGTGCTTAAACCAGGCTTCAAGTGCTAGAATAGTTATGGATGGAAT 3887 Query 136 AATAGAATAGGACGTGCGGTTCTA-TTTTGTTGGTTTCTAGGAC-CGCCGTAATGATTAA 193 || |||| ||| | | |||||| || | |||||| ||| | | |||| || || Sbjct 3888 AAGGAAATAAGAC-TTCTGTTCTACTTGTACTGGTTTATAGATCAAGAGATAATAATAAA 3946 Query 194 TAGGGATAGTCGGGGGT-GTCAGTATTCAATTGTC---AGAGGTGAAATTCTTGGATTTA 249 |||| | ||| || | | |||| ||| |||| |||||||||||||||||| | Sbjct 3947 TAGGAACAGTTTAGGATCATTAGTA-TCA--TGTCCCGAGAGGTGAAATTCTTGGA-CTG 4002 Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 | | ||||| ||||| | || |||| |||||||||||||||| ||||||| Sbjct 4003 TCG-----TAACT-TAACGAAACCATTTGCCAAATATGTTTTCATTAATCA-AGAACGAA 4055 Query 310 AGTTAGGGG 318 | |||| || Sbjct 4056 AATTAGAGG 4064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 913085512768