Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26] 231,041 sequences; 489,347,612 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq68578 84.2 2e-14 >seq68578 Length=325 Score = 84.2 bits (92), Expect = 2e-14 Identities = 134/187 (72%), Gaps = 14/187 (7%) Strand=Plus/Minus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| || || |||| ||| |||||||| || | | ||| | ||| |||| Sbjct 226 GGTGGATGCCTTGGTACTAGGAGCCGATGAAGGACGGGACTAACACCGATATGCTTCGGG 167 Query 68 GATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGAT-ATATT---- 122 || | || || | |||||||| |||| ||||||||||| ||||| || || || Sbjct 166 GAGCTGTACGTAAGCTTTGATCCGGAGATTTCCGAATGGGGAAACCCAATCATCTTTACC 107 Query 123 GGAGA-TATATCATAACG-----CTAGGC--GTT-AGGCGAACGTGGGGAACTGAAACAT 173 | || || | | | | | ||| | ||| |||| ||||||||||||||||||| Sbjct 106 GATGATTACAACTTGATGAATACATAGTCAAGTTGAGGCAGACGTGGGGAACTGAAACAT 47 Query 174 CTAAGTA 180 ||||||| Sbjct 46 CTAAGTA 40 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475732821621