Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26] 231,041 sequences; 489,347,612 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq56370 167 4e-39 seq220284 158 2e-36 seq189887 140 5e-31 seq230665 123 4e-26 seq58364 102 1e-19 seq58171 102 1e-19 >seq56370 Length=230 Score = 167 bits (184), Expect = 4e-39 Identities = 97/100 (97%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 228 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACGAACTAAGAACGGCCATGC 169 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||| || ||||||||||||||||||||| Sbjct 168 ACCACCACCCATAGATTCGAGAAAGAGCTATCAATCTGTC 129 >seq220284 Length=2196 Score = 158 bits (174), Expect = 2e-36 Identities = 95/100 (95%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct 2052 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCTACGAACTAAGAACGGCCATGC 2111 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||| ||| || ||||||||||||||||||||| Sbjct 2112 ACCACCACCCAAAGATTCGAGAAAGAGCTATCAATCTGTC 2151 >seq189887 Length=762 Score = 140 bits (154), Expect = 5e-31 Identities = 82/85 (96%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 85 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACGAACTAAGAACGGCCATGC 26 Query 219 ACCACCACCCATAGAATCAAGAAAG 243 ||||||||||||||| || |||||| Sbjct 25 ACCACCACCCATAGATTCGAGAAAG 1 Score = 102 bits (112), Expect = 1e-19 Identities = 88/106 (83%), Gaps = 5/106 (5%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| |||||| |||||||||||||||||||||||||||||| ||| Sbjct 330 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 272 Query 76 AAACTTCCAT--TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119 || || ||| | ||| || || | | |||| | |||||||| || Sbjct 271 AATCT--CATTATTGCTAGACGCAATTTGTCCATTTAAGAAGCTAG 228 >seq230665 Length=11326 Score = 123 bits (136), Expect = 4e-26 Identities = 86/98 (88%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 161 CTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCAC 220 ||||||||||||||||||||||||||||||| ||| ||| ||||||||||||| ||| || Sbjct 8833 CTCGTTCGTTATCGGAATTAACCAGACAAATGACTACACGAACTAAGAACGGCTATGTAC 8774 Query 221 CACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||| || ||||| ||| | ||||||||||||||||| Sbjct 8773 CACTTCCTATAGATTCATCATAGAGCTATCAATCTGTC 8736 >seq58364 Length=270 Score = 102 bits (112), Expect = 1e-19 Identities = 88/106 (83%), Gaps = 5/106 (5%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| |||||| |||||||||||||||||||||||||||||| ||| Sbjct 143 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 85 Query 76 AAACTTCCAT--TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119 || || ||| | ||| || || | | |||| | |||||||| || Sbjct 84 AATCT--CATTATTGCTAGACGCAATTTGTCCATTTAAGAAGCTAG 41 >seq58171 Length=266 Score = 102 bits (112), Expect = 1e-19 Identities = 88/106 (83%), Gaps = 5/106 (5%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| |||||| |||||||||||||||||||||||||||||| ||| Sbjct 233 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 175 Query 76 AAACTTCCAT--TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119 || || ||| | ||| || || | | |||| | |||||||| || Sbjct 174 AATCT--CATTATTGCTAGACGCAATTTGTCCATTTAAGAAGCTAG 131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795016594521