Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26] 231,041 sequences; 489,347,612 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq59983 212 1e-52 seq46791 165 1e-38 seq220890 150 3e-34 seq45139 147 4e-33 seq135516 109 9e-22 seq10777 109 9e-22 seq43608 100 5e-19 seq56208 75.2 2e-11 seq209451 73.4 7e-11 >seq59983 Length=294 Score = 212 bits (234), Expect = 1e-52 Identities = 156/179 (87%), Gaps = 2/179 (1%) Strand=Plus/Minus Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATC 154 ||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| Sbjct 280 TGGGTGAACAATCCAACGCTTGGTGAATTTTGCTTCACAATGATAGGAAGAGCCGACATC 221 Query 155 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 214 ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| Sbjct 220 GAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGT 161 Query 215 GGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA-CTAAAGGATCGATAGGCC 272 ||||||||||||| ||||||| | | ||| || | | |||||||||||||||| Sbjct 160 GGTAACTTTTCTGACACCTCTTG-TTAAAAACTCTTTAAACCAAAAGGATCGATAGGCC 103 >seq46791 Length=19295 Score = 165 bits (182), Expect = 1e-38 Identities = 134/160 (84%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 ||||| |||| |||||||||||| ||| ||| ||||||||||| ||||| |||| || || Sbjct 3642 GTCATTAGTATGGTAAAACTAACATGTTTCACGACGGTCTAAATCCAGCCCACGCTCTCT 3583 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 | | |||||||||||||||||| ||||| |||||| || ||||||||| ||| Sbjct 3582 TGCA-TAAGTGAACAATCCAACGCTTGGTGAATTTTGCTTCACAATAATAGGAAGAACCG 3524 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTA-TGAACGCTT 188 |||||||||||||||||||| ||||||||| ||||||||| Sbjct 3523 ACATCGAAGGATCAAAAAGCGACGTCGCTATTGAACGCTT 3484 >seq220890 Length=2598 Score = 150 bits (166), Expect = 3e-34 Identities = 141/178 (79%), Gaps = 1/178 (1%) Strand=Plus/Plus Query 58 TCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTAC 117 ||| ||| ||||| ||||| ||||||||| || |||||||||||| || | ||| Sbjct 1090 TCACGACAATCTAAGTTCAGCTTACGTTCCCTTGTA-TGGGTGAACAATGCAGCTCTTGT 1148 Query 118 CGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 177 ||||| |||||| | || |||| ||||| ||||||| | ||| ||||||| ||||||| Sbjct 1149 TGAATTTTGCTTCAGAATTATAGAAAGAGTCGACATCAAGTGATTAAAAAGCGACGTCGC 1208 Query 178 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCT 235 |||||| |||| | |||| ||||| ||||||||||||||||||| || ||||||| Sbjct 1209 TATGAAAGCTTAGTCGCCAGAAGCCTATTATCCCTGTGGTAACTTTCCTTACACCTCT 1266 >seq45139 Length=6117 Score = 147 bits (162), Expect = 4e-33 Identities = 140/178 (79%), Gaps = 1/178 (1%) Strand=Plus/Plus Query 58 TCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTAC 117 ||| ||| ||||| ||| | |||||| || || ||| |||||||| || | || Sbjct 1350 TCACGACAATCTAAGTTCAGTTTACGTTCACTTGTA-TGGATGAACAATGCAGCTTTTGT 1408 Query 118 CGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 177 ||||| |||||| | |||||| ||||||||||||| | ||||||||||| ||||||| Sbjct 1409 TGAATTTTGCTTCAGAATGATATAAAGAGCCGACATCAAGTGATCAAAAAGCGACGTCGC 1468 Query 178 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCT 235 ||||||||||| | |||||||||| |||| ||||||||||||||||| || |||| Sbjct 1469 TATGAACGCTTAGTCGCCACAAGCCTATTATACCTGTGGTAACTTTTCTTACATCTCT 1526 >seq135516 Length=502 Score = 109 bits (120), Expect = 9e-22 Identities = 110/139 (79%), Gaps = 3/139 (2%) Strand=Plus/Minus Query 30 GTCATCAGTAGGGTAAAACTAACC-TGTCTCATGACGGTCTAAACCCAGCTCACGTTCCC 88 ||||| |||||||| | | ||| | ||||| |||||||||| |||||||||||||||| Sbjct 455 GTCATTAGTAGGGTTAGTTTTACCCTATCTCACGACGGTCTAATCCCAGCTCACGTTCCC 396 Query 89 TATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCC 148 | | | | ||| |||||||||||||| |||| ||||| |||||| | ||||| Sbjct 395 TTACA-TAGATGA-CAATCCAACGCTTATTAAATTTTGCTTAACAATGATATAAGGAGCC 338 Query 149 GACATCGAAGGATCAAAAA 167 ||||||||||||| ||||| Sbjct 337 GACATCGAAGGATAAAAAA 319 >seq10777 Length=8883 Score = 109 bits (120), Expect = 9e-22 Identities = 87/102 (85%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 172 CGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCAC 231 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 248 CGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACAC 189 Query 232 CTCTAGCCTCAAATTTCGAGGGA-CTAAAGGATCGATAGGCC 272 |||| | | ||| || | | |||||||||||||||| Sbjct 188 CTCTTG-TTAAAAACTCTTTAAACCAAAAGGATCGATAGGCC 148 >seq43608 Length=12439 Score = 100 bits (110), Expect = 5e-19 Identities = 107/136 (79%), Gaps = 4/136 (3%) Strand=Plus/Plus Query 30 GTCATCAGTAGGGTAAAACTAACC-TGTCTCATGACGGTCTAAACCCAGCTCACGTTCCC 88 ||||| |||||||| | | ||| | ||||| |||||||||| || ||||||||| ||| Sbjct 156 GTCATTAGTAGGGTTAGTTTTACCCTATCTCACGACGGTCTAATCCTAGCTCACGTACCC 215 Query 89 TATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCC 148 | | ||||||| ||||| |||||||| ||||| | ||| |||||| ||||||| Sbjct 216 TTGCA-TGGGTGA-CAATC-AACGCTTAGTGAATTTCGTTTCACATTGATAGAAAGAGCC 272 Query 149 GACATCGAAGGATCAA 164 ||||||||||||| || Sbjct 273 GACATCGAAGGATAAA 288 >seq56208 Length=227 Score = 75.2 bits (82), Expect = 2e-11 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCC 88 ||||| |||| |||||||||| |||| || |||||||| ||||| |||||||||||||| Sbjct 194 GTCATTAGTATGGTAAAACTAGCCTGCCTGATGACGGTGTAAACTCAGCTCACGTTCCC 136 >seq209451 Length=1091 Score = 73.4 bits (80), Expect = 7e-11 Identities = 55/65 (85%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 137 ATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCA 196 |||| |||| |||||||| |||||||||||| | ||||||||||||||| |||| ||| Sbjct 833 ATAGAAAGAACCGACATCAAAGGATCAAAAATCGACGTCGCTATGAACGTTTGGTCGCCC 774 Query 197 CAAGC 201 |||| Sbjct 773 TAAGC 769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 852425985696