Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26] 231,041 sequences; 489,347,612 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq68578 111 3e-22 >seq68578 Length=325 Score = 111 bits (122), Expect = 3e-22 Identities = 171/236 (72%), Gaps = 11/236 (5%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGT-AGTAGCTTGCGAT 59 || || ||||||||||||||||| | || |||||||||||| | || | |||| Sbjct 235 AGGGCGCATGGTGGATGCCTTGGTACTAGGAGCCGATGAAGGACGGGACTAACAC-CGAT 177 Query 60 AAGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGG 119 | ||| ||||||| | | | |||||||||| |||||||||||||||||||||| Sbjct 176 ATGCTTCGGGGAGCT-GTACGTAAGCTTTGATCCGGAGATTTCCGAATGGGGAAACCCAA 118 Query 120 CC--CTTTG--GGTCATTGCA---TGCTGAATACATAGGTATGCAAAGCGA-ACGCGGCG 171 | |||| | | ||| || || ||||||||||| | | || | ||| || | Sbjct 117 TCATCTTTACCGATGATTACAACTTGATGAATACATAGTCAAGTTGAGGCAGACGTGGGG 58 Query 172 AACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAG 227 |||||||||||||||||| | |||||| ||||| || ||||||| |||||| Sbjct 57 AACTGAAACATCTAAGTACCCACAGGAAGAGAAAGAAAAATCGATTCCCTAAGTAG 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 916278119456