Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26] 231,041 sequences; 489,347,612 total letters Query= NC_011356.1 Length=54896 Score E Sequences producing significant alignments: (Bits) Value seq222403 91.5 5e-14 >seq222403 Length=4011 Score = 91.5 bits (100), Expect = 5e-14 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 29769 CCAGGGCTGGAAACTGGGCGGGGCCATTAAAACCACCGAGCGCAAACTGGCTGAAGGGGT 29828 |||||||||||| || ||||| || |||||| | || || ||||| |||| | | Sbjct 3668 CCAGGGCTGGAAGCTCACAGGGGCAATCAAAACCGCAGAACGGAAACTTGCTGGACGTAC 3609 Query 29829 GCTGGTGCATGGTGACCAGCCCCTGATGGCCTGGTGTGTCGGCAATGCCCGGGTGGAGCC 29888 ||| | ||| ||| |||||| | ||||| ||| ||||| |||||||| ||||| | Sbjct 3608 TCTGATCCATTGTGGGCAGCCCATCATGGCATGGGCAGTCGGAAATGCCCGTGTGGAAGC 3549 Query 29889 TAAAGGTAACGCCATTCTTATCACCAAACAGGCCAGTGGACGGGGAAAAATTGACCCGCT 29948 ||||| || ||| || | || || |||||| || || ||| || ||||| || Sbjct 3548 GAAAGGAAATGCCGTTGTCATAGAAAAGCAGGCCGCAGGTTGGTCAAAGATAGACCCTCT 3489 Query 29949 GATGGCGCTGTTC 29961 ||| |||| ||| Sbjct 3488 TATGTCGCTTTTC 3476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175063971007236