Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melipona_20quadrifasciata_20[genbank_20GCA_5F001276565.1_202015-09- 04] 2,866 sequences; 256,302,695 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq30 86.0 7e-15 seq347 78.8 1e-12 >seq30 Length=830597 Score = 86.0 bits (94), Expect = 7e-15 Identities = 84/105 (80%), Gaps = 5/105 (5%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAAT-GTATTCGGGC 68 ||||||||||||||| || | ||||||||| |||||||||||| | |||||| ||| Sbjct 43486 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACACAGTATTCAGGC 43544 Query 69 GTA---AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | | |||||||||| | ||||||||||| |||| ||||| || Sbjct 43545 GAAGGTAGCCTGCTTTAAGCACTCTAATTTGTTCAAAGTAAACGT 43589 >seq347 Length=255 Score = 78.8 bits (86), Expect = 1e-12 Identities = 81/103 (79%), Gaps = 5/103 (5%) Strand=Plus/Minus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATG-TATTCGGGCGT 70 ||||||||||||| || | ||||||||| |||||||||||| | ||||| |||| Sbjct 255 ACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACAGAATATTCAGGCGA 197 Query 71 A---AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | |||||||||| | ||||||||||| |||| ||||| || Sbjct 196 AGGTAGCCTGCTTTAAGCACTCTAATTTGTTCAAAGTAAACGT 154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595183474644