Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melipona_20quadrifasciata_20[genbank_20GCA_5F001276565.1_202015-09- 04] 2,866 sequences; 256,302,695 total letters Query= NC_033778.1 Length=111453 Score E Sequences producing significant alignments: (Bits) Value seq108 114 9e-21 >seq108 Length=1549515 Score = 114 bits (126), Expect = 9e-21 Identities = 158/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 26029 ACATTTGAAACATGGCCAAAAGCAATGATGCGAATTAAAGAACAACTTTCAAATGCGGGt 26088 ||||||| | ||||||||||| ||| | || || |||||||| ||| ||| || Sbjct 237377 ACATTTGCATCATGGCCAAAATTTATGGCACAAACAAAGGAACAACTAGCAAGTGCAGGC 237436 Query 26089 tttttttATTCAGGAAATGGAGATAAAGTATTATGTTATCAATGTGGTGGTTCTATAAAT 26148 |||| |||| | || || || ||| || |||||||| || ||||| ||| | |||| Sbjct 237437 TTTTATTATACTGGGAAAGGTGATCAAACTTTATGTTACCACTGTGGAGGTGGTTTAAAA 237496 Query 26149 AATTTTGAATTACATGACGATCCATGGATACGACATGCAAAAGAATATCCAAATTGTTTA 26208 ||| ||| | || | ||||| ||| || |||||||||| | | | || |||| Sbjct 237497 GATTGGGAACCAGATAATGATCCTTGGGAACAACATGCAAAATGGTTTTCTAAATGTTGT 237556 Query 26209 TATGTATTTCTTGTTAAAGGACAAGATTATATAAATAGAAT 26249 ||| |||| | ||| |||| ||||||||| |||||| ||| Sbjct 237557 TATTTATTAATGGTTCAAGGGCAAGATTATGTAAATAAAAT 237597 Score = 114 bits (126), Expect = 9e-21 Identities = 122/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 26371 GATGATGGTAGAATATGTAAAATTTGTTATAATGAAGAAATCGGTGTTGTATTTTTACCG 26430 ||||||| || || ||||||||||||||||||| |||| | || || ||||||||||| Sbjct 237924 GATGATGCAAGGATGTGTAAAATTTGTTATAATGGAGAATTAGGGGTGGTATTTTTACCA 237983 Query 26431 TGTGGTCATATTGTAGCATGTATTAAATGTGCACCCGGAATGATGAATTGTCCAGTCTGT 26490 ||||| ||||| || || ||| | | |||||| || || |||| | |||| |||| || Sbjct 237984 TGTGGACATATGGTTGCGTGTGTAAGATGTGCTCCAGGCATGACAACTTGTGCAGTATGC 238043 Query 26491 CGTAAACCAGTCAGCATGAATATACGAACATTCTTTTCATA 26531 | |||| || | |||| | ||||| | || || ||||| Sbjct 238044 AGGGAACCTGTTACTATGACTGTACGAGCCTTTTTCTCATA 238084 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/226 (69%), Gaps = 9/226 (4%) Strand=Plus/Plus Query 25598 TTGCAAAAGCTGGATTGTATTATATTGGTGAAAATGATAGTGTTAAATGTTTTGAATGTA 25657 ||||| || ||||| ||||||| ||||| ||||| || | ||||||||||||| Sbjct 236997 TTGCAGCTGCAGGATTCTATTATACAGGTGATGCTGATAAAGTAAGATGTTTTGAATGTC 237056 Query 25658 ACGTTACTATTATGAAATGGGAAGAAGATGATGAACCTTTAGCATGTCATAAAAGATGGT 25717 | || || |||||| ||||| ||| || | || |||| | || |||| Sbjct 237057 AGGTAGAGATAGGTCAATGGGTAGAAGGGGATATTCCCATGGCTGATCATCAGAGGTGGT 237116 Query 25718 CTGCAAGATGTCGATTTATTAGAAAAATTGCTTGTGGAAATGTTCCAATAGGTATTGATC 25777 |||||||||| |||||||| | |||||| ||| || ||||| ||||| || | ||| Sbjct 237117 CTGCAAGATGCAGATTTATTCGCAAAATTAATTGCGGCAATGTACCAATTGGGGTGGATG 237176 Query 25778 CAAATACAG---TACCAATTCCTAAAAGGAGTTATGATGTATGTGG 25820 | | | ||| ||||| |||| ||| || ||||||||||| Sbjct 237177 CCAGTTCAGTTATACCA---CCTAGAAGTAG---GGATGTATGTGG 237216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356512346811564