Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melitaea_20cinxia_20[genbank_20GCA_5F000716385.1_202014-07-09]
8,261 sequences; 389,907,520 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq1 212 9e-53
>seq1
Length=8004
Score = 212 bits (234), Expect = 9e-53
Identities = 186/226 (82%), Gaps = 7/226 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |
Sbjct 2567 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTAGGAATT-C 2510
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| | | | |||||||| | ||||||| ||||| | | |||||| | ||
Sbjct 2509 CTCGTTTATGGGGGATAATTGCAAACCCCAATCCCCAGCACGAAGGAGTTTCAACGGGTT 2450
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| ||| | ||||| || || || | ||| | | |||||||||||||||||||
Sbjct 2449 GCCCGGGCCTCTAGGCCAGGGAGA---ACATGCTGATTCCTTCAGTGTAGCGCGCGTGCG 2393
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225
|||||| |||||||||||||||||||||||||||||| ||||| ||
Sbjct 2392 GCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 2348
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751939818615
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |