Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melitaea_20cinxia_20[genbank_20GCA_5F000716385.1_202014-07-09] 8,261 sequences; 389,907,520 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1 168 1e-39 >seq1 Length=8004 Score = 168 bits (186), Expect = 1e-39 Identities = 213/288 (74%), Gaps = 11/288 (4%) Strand=Plus/Plus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| |||| || |||| || | ||| | |||||||||||| ||||||||||| || Sbjct 1606 TGCTCTTCGGTGAGTGTCGAGGTGGGCCGACAATTTTACTTTGAACAAATTAGAGTGCTC 1665 Query 100 AAAGCAGGCCTTT------GCTCGAATACATTA-GCATGGAATAATAGAATAGGACGTGC 152 ||||| ||| ||| ||||| | |||||||||||||||||| || | | Sbjct 1666 AAAGCGGGCTCAAAATGCCGCTTGAATATTTCGTGCATGGAATAATAGAATATGATCT-C 1724 Query 153 GGTTCTATTTTGTTGGTTTCTAGGAC--CGCCGTAATGATTAATAGGGATAGTCGGGGGT 210 ||||||||||||||||||| || || || ||||||||||||||||||| ||||| Sbjct 1725 GGTTCTATTTTGTTGGTTTTCAGAACTCCGAGGTAATGATTAATAGGGATAACTGGGGGC 1784 Query 211 GTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAA 270 | ||||| || ||||||||||||||||||| ||||| ||| | ||||| Sbjct 1785 ATTCGTATTGCGACGTTAGAGGTGAAATTCTTGGATCGTCGCAAGACGAACATCAGCGAA 1844 Query 271 AGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||| || |||| | ||||||||| ||||| ||||||||||||| || Sbjct 1845 AGCATTTGCCAAAGGTGTTTTCATCAATCA-AGAACGAAAGTTAGAGG 1891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915124395328