Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melitaea_20cinxia_20[genbank_20GCA_5F000716385.1_202014-07-09]
8,261 sequences; 389,907,520 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq1 168 1e-39
>seq1
Length=8004
Score = 168 bits (186), Expect = 1e-39
Identities = 213/288 (74%), Gaps = 11/288 (4%)
Strand=Plus/Plus
Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99
||| |||| || |||| || | ||| | |||||||||||| ||||||||||| ||
Sbjct 1606 TGCTCTTCGGTGAGTGTCGAGGTGGGCCGACAATTTTACTTTGAACAAATTAGAGTGCTC 1665
Query 100 AAAGCAGGCCTTT------GCTCGAATACATTA-GCATGGAATAATAGAATAGGACGTGC 152
||||| ||| ||| ||||| | |||||||||||||||||| || | |
Sbjct 1666 AAAGCGGGCTCAAAATGCCGCTTGAATATTTCGTGCATGGAATAATAGAATATGATCT-C 1724
Query 153 GGTTCTATTTTGTTGGTTTCTAGGAC--CGCCGTAATGATTAATAGGGATAGTCGGGGGT 210
||||||||||||||||||| || || || ||||||||||||||||||| |||||
Sbjct 1725 GGTTCTATTTTGTTGGTTTTCAGAACTCCGAGGTAATGATTAATAGGGATAACTGGGGGC 1784
Query 211 GTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAA 270
| ||||| || ||||||||||||||||||| ||||| ||| | |||||
Sbjct 1785 ATTCGTATTGCGACGTTAGAGGTGAAATTCTTGGATCGTCGCAAGACGAACATCAGCGAA 1844
Query 271 AGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
||| || |||| | ||||||||| ||||| ||||||||||||| ||
Sbjct 1845 AGCATTTGCCAAAGGTGTTTTCATCAATCA-AGAACGAAAGTTAGAGG 1891
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915124395328
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |