Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melitaea_20cinxia_20[genbank_20GCA_5F000716385.1_202014-07-09] 8,261 sequences; 389,907,520 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1 217 2e-54 >seq1 Length=8004 Score = 217 bits (240), Expect = 2e-54 Identities = 216/282 (77%), Gaps = 37/282 (13%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 2415 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 2356 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC-----------CAGC 120 | |||| || | |||| |||||| |||||||||||||| | || Sbjct 2355 C-TCAATCT-CGTGCGGCTCGAAGCCGCCGGTCCCTCTAAGAAGAATTTTAATACGCCGC 2298 Query 121 CA---------CCAACCATAGTCG-----------ATGGGG----CTATTTAGCAGGTTA 156 || || ||| | ||| ||| | |||||||||||| || Sbjct 2297 CAGTGAGTTGTCCGACCGAAATCGGACACACCTAAATGACGACGCCTATTTAGCAGGCTA 2238 Query 157 AGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCAT 216 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct 2237 GAGTCTCGTTCGTTACCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCAT 2178 Query 217 GCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||| |||||||||||||||| | |||||||| Sbjct 2177 GCACCACCACCCACCGAATCAAGAAAGAGCTGTTAATCTGTC 2136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796736233341