Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melitaea_20cinxia_20[genbank_20GCA_5F000716385.1_202014-07-09]
8,261 sequences; 389,907,520 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq1 351 2e-94
seq3073 219 7e-55
>seq1
Length=8004
Score = 351 bits (388), Expect = 2e-94
Identities = 248/281 (88%), Gaps = 2/281 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | ||||| || | ||||| | ||||||||||||||||||||||||||||
Sbjct 7379 TACTGAGCAGTATTACTATCGCAACGACGAGCCATCAGTAGGGTAAAACTAACCTGTCTC 7320
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| |||||||||||||||||||||||||||| || ||||||||||||||||||||| ||
Sbjct 7319 ACGACGGTCTAAACCCAGCTCACGTTCCCTTTTGATGGGTGAACAATCCAACGCTTGGCG 7260
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
|||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7259 AATTTTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 7200
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 7199 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTTG-C 7141
Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280
| ||| || ||||||||||||||||||| |||||
Sbjct 7140 TAAAAACTCTTTATACTAAAGGATCGATAGGCCGTGCTTTC 7100
>seq3073
Length=119683
Score = 219 bits (242), Expect = 7e-55
Identities = 152/171 (89%), Gaps = 1/171 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | ||||| || | ||||| | ||||||||||||||||||||||||||||
Sbjct 22818 TACTGAGCAGTATTACTATCGCAACGACGAGCCATCAGTAGGGTAAAACTAACCTGTCTC 22759
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| |||||||||||||||||||||||||||| || ||||||||||||||||||||| ||
Sbjct 22758 ACGACGGTCTAAACCCAGCTCACGTTCCCTTTTGATGGGTGAACAATCCAACGCTTGGCG 22699
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCA 170
|||| ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 22698 AATTTTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCA 22648
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854329418016
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |