Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melitaea_20cinxia_20[genbank_20GCA_5F000716385.1_202014-07-09]
8,261 sequences; 389,907,520 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq3073 78.8 2e-12
seq1 78.8 2e-12
>seq3073
Length=119683
Score = 78.8 bits (86), Expect = 2e-12
Identities = 88/115 (77%), Gaps = 2/115 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | ||| || | |||||| ||| | | || | | | ||
Sbjct 22816 GTACGAGAGGAACCGCAGT-TTCGGAC-ATTTGGTTCATGCATTCGGCCGAGCGGCCGGT 22873
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCA 115
| |||||||||||||||||| || ||||| ||||||||| ||||| | ||| |||
Sbjct 22874 GGCGCGAAGCTACCATCTGCGGGGTTATGCCTGAACGCCACTAAGGCCGAAGCCA 22928
>seq1
Length=8004
Score = 78.8 bits (86), Expect = 2e-12
Identities = 88/115 (77%), Gaps = 2/115 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | ||| || | |||||| ||| | | || | | | ||
Sbjct 7377 GTACGAGAGGAACCGCAGT-TTCGGAC-ATTTGGTTCATGCACTCGGCCGAGCGGCCGGT 7434
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCA 115
| |||||||||||||| || |||||||| ||||||||||||||| | ||| |||
Sbjct 7435 GGTGCGAAGCTACCATCCGCGGGATTATGCCTGAACGCCTCTAAGGCCGAAGCCA 7489
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819134440704
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |