Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melitaea_20cinxia_20[genbank_20GCA_5F000716385.1_202014-07-09] 8,261 sequences; 389,907,520 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1 405 2e-110 seq2809 102 2e-19 >seq1 Length=8004 Score = 405 bits (448), Expect = 2e-110 Identities = 409/529 (77%), Gaps = 26/529 (5%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| ||||| || || | |||||| || ||||| ||||| | ||||||||| Sbjct 1373 GTACTCATTCCGATTACGAGGCCTCGAAAGAGTCCCGTATCGTTATTTTTCGTCACTACC 1314 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1313 TCCCCGTGCCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 1254 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| Sbjct 1253 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGACAACCATGGT 1194 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 || | | ||||||||||||||||||| |||||| ||||||| || | ||||||| Sbjct 1193 AGTCGCAGAAACTACCATCGAAAGTTGATAAGGCAGACATTTGAAAGATGCGTCGCCGGT 1134 Query 240 TCAAGGCCATGCGATTCG-TTAAGTTATTATGAATCACCAA-------------GGA--- 282 | | ||||||||| | ||||||| || ||| ||| ||| Sbjct 1133 ACTGGACCATGCGATCGGCAAAAGTTATCCAGATTCATCAAAATTAACGACTTCGGACGA 1074 Query 283 -GCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACAC----CCCTTCCGAAGTCGGGG 337 | || | || | | |||| |||||||||| ||| ||| || ||| | | Sbjct 1073 GACGCCCTCCGTCGATTGGTTTTGATCTAATAAAAGCACTCATCCCATCACTGGTCAGAG 1014 Query 338 TTTT--TAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATC 395 || | | |||||||||||||||||||||||||| |||||||| ||| ||| ||| Sbjct 1013 TTCTGATTGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGAGTAAGATC 954 Query 396 AAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATAC 455 || ||| | ||||||| || |||||||||||| || || | || | | |||| || Sbjct 953 TAAGGAACCAAAACTGATATATTGAGCCATTCGCGGTATCGCCTTA-ATACGGCTTGCAC 895 Query 456 TTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 | ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 894 TGAGACATGCATGGCTTAATCTTTGAGACAAGCATATAACTACTGGCAG 846 >seq2809 Length=69525 Score = 102 bits (112), Expect = 2e-19 Identities = 65/71 (92%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 56 TACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG 115 ||| || ||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 32373 TACTTCTTCGTTCCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG 32432 Query 116 CCGTTTCTCAG 126 ||||||||||| Sbjct 32433 CCGTTTCTCAG 32443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510275225856