Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq41215 120 1e-24 seq28078 100 1e-18 seq44471 77.0 1e-11 >seq41215 Length=1933 Score = 120 bits (132), Expect = 1e-24 Identities = 105/131 (80%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 553 AAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG 612 |||||| || ||||| |||||||||||||||||||||||||| ||| ||||| ||| Sbjct 1163 AAGAGCGTACTTGTTGAGACCCGAAAGATGGTGAACTATGCCTAGCCAGGATGAAGTCAG 1222 Query 613 AGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGG 672 ||| ||| |||| || || |||| ||||| |||||||||||||||||| | |||| Sbjct 1223 GAGAACTTCTTATGGAAGCCCGTAGCGATTCTGACGTGCAAATCGATCGTCAGAGCTGGG 1282 Query 673 TATAGGGGCGA 683 ||||| |||| Sbjct 1283 GATAGGAGCGA 1293 Score = 75.2 bits (82), Expect = 5e-11 Identities = 108/151 (72%), Gaps = 1/151 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| ||| ||| || |||| ||| | || |||||| | | || || || ||| Sbjct 240 GAGTCGGATTGCTTGAGAGTGCAATCTTAAGTTGGTGGTAAACTCCATCGAAGACTTAAT 299 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | | |||||||||||| ||||||| |||| ||||| ||||||||||| || | Sbjct 300 ACAACCACAAGACCGATAGCGAACAAGTACTGTGAGGGAAAGTTGAAAAGCACTCTGAAG 359 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAA 190 || || | ||||| |||||||| ||| || Sbjct 360 AGTAAG-TCAAAAGTACGTGAAACCGTTTAA 389 >seq28078 Length=742 Score = 100 bits (110), Expect = 1e-18 Identities = 82/100 (82%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 584 TGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTC 643 ||||||||||||| ||| ||||| ||| |||| |||| |||| | || |||| ||| Sbjct 1 TGAACTATGCCTGGCCAGGATGAAGTCAGGAGAAATTCTGATGGAAGTCCGTAGCGATTC 60 Query 644 TGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || |||||||||||||||||| | ||||||||||||||| Sbjct 61 TGACGTGCAAATCGATCGTCAGAGCTGGGTATAGGGGCGA 100 >seq44471 Length=882 Score = 77.0 bits (84), Expect = 1e-11 Identities = 67/82 (82%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 109 AGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTA 168 |||||||||||| ||||||| |||| ||||| ||||||||||| || | |||||| | Sbjct 882 AGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGCACTCTGAAGAGAGAG-TC 824 Query 169 AAAAGCACGTGAAATTGTTGAA 190 ||||| |||||||| ||| || Sbjct 823 AAAAGTACGTGAAACCGTTTAA 802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2077963258150