Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq44470 441 2e-121 seq47658 387 4e-105 seq20256 313 8e-83 seq47161 109 2e-21 >seq44470 Length=2021 Score = 441 bits (488), Expect = 2e-121 Identities = 328/387 (85%), Gaps = 25/387 (6%) Strand=Plus/Plus Query 172 GTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCC-- 229 ||||||||| || || ||||||| ||||||||| ||||||||||||||| | || | Sbjct 568 GTTCCGCTTAATCGAGTAAGTAAGGAAACGATAAAAGTAGTGGTATTTCACATTCGACTG 627 Query 230 -------------GAAACGGC---------TCCCACTTATTC-TACACCTCTCAAGTCAT 266 ||| || | |||||||||| | ||||||||| | ||| Sbjct 628 CGAATGTCACCGCGAAGCGACGCCACAGTCTCCCACTTATGCCTACACCTCTTATGTCTC 687 Query 267 TTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCA 326 |||||||| | ||| ||||||||||||||||||||||||||||||||| ||| ||| Sbjct 688 CTCACAAAGCCAAACTGGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTAATTTTTCCA 747 Query 327 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 386 ||||||||||||||||||||||||||||||| ||||||||| |||| || ||||||||| Sbjct 748 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAAAGTAGATAGAGACAACGGAAATCTCGTT 807 Query 387 AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCA 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 808 AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCA 867 Query 447 TAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCA 506 |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct 868 TAGTTACTCCCGCCGTTTACCCGCGCTTTATTGAATTTCTTCACATTGACATTCAGAGCA 927 Query 507 CTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||| Sbjct 928 CTGGGCAGAAATCACATTGCGTCAACA 954 Score = 113 bits (124), Expect = 1e-22 Identities = 97/120 (81%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| ||| || ||| ||||||| ||| |||| |||||||||||||||||||| Sbjct 128 CTTTTACTCGACGCGAGGTTTCTGTCCTCGCTGAGCTAGCCTTAGGACACCTGCGTTATT 187 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||||||| ||||||||| ||||||| | |||||||||||| || | |||||| Sbjct 188 GTTTGACAGATGTACCGCCCCAGTCAAACTCTCTGCCTGACAATGTCCTCGAATCGGATC 247 >seq47658 Length=1447 Score = 387 bits (428), Expect = 4e-105 Identities = 316/387 (82%), Gaps = 25/387 (6%) Strand=Plus/Plus Query 172 GTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCC-- 229 ||||||||| || || ||||||| ||||||||| || |||||||||||| | || | Sbjct 16 GTTCCGCTTAATCGAGTAAGTAAGGAAACGATAAAAGTCGTGGTATTTCACATTCGACTG 75 Query 230 -------------GAAACGGC---------TCCCACTTATTC-TACACCTCTCAAGTCAT 266 ||| || | ||||||||| | ||||||||||| ||| Sbjct 76 CGAATGTCGCCGCGAAGCGACGCTACAGTCTCCCACTTAAGCCTACACCTCTCATGTCTC 135 Query 267 TTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCA 326 |||||||| | ||| ||||||||||||||| |||||||||| |||| | ||| ||| Sbjct 136 CTCACAAAGCCAAACTGGAGTCAAGCTCAACATGGTCTTCTTTTCCCGTTAATTTTTCCA 195 Query 327 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 386 ||||||||||||| ||||||||||||||| ||||||||| |||| ||| |||||| || Sbjct 196 AGCCCGTTCCCTTAAATGTGGTTTCGCTAGAAAGTAGATAGAGACAATGGAAATCTCATT 255 Query 387 AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCA 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 256 AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCA 315 Query 447 TAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCA 506 |||||||||||||||||||||||||||| |||||||||||||| |||| ||||| || | Sbjct 316 TAGTTACTCCCGCCGTTTACCCGCGCTTTATTGAATTTCTTCACATTGAAATTCAAAGTA 375 Query 507 CTGGGCAGAAATCACATTGCGTCAACA 533 ||| ||||||||||||||||| ||||| Sbjct 376 CTGAGCAGAAATCACATTGCGCCAACA 402 >seq20256 Length=4980 Score = 313 bits (346), Expect = 8e-83 Identities = 255/313 (81%), Gaps = 25/313 (8%) Strand=Plus/Minus Query 172 GTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCC-- 229 ||||||||| || || ||||||| ||||||||| |||||||||||| || | || | Sbjct 4965 GTTCCGCTTAATCGAGTAAGTAAGGAAACGATAAAAGTAGTGGTATTTTACATTCGACTG 4906 Query 230 -------------GAAACGGC---------TCCCACTTATTC-TACACCTCTCAAGTCAT 266 ||| || | |||||||||| | ||||||||| | ||| Sbjct 4905 CGAATGTCGCCGCGAAGCGACGCCACAGTCTCCCACTTATGCCTACACCTCTTATGTCTC 4846 Query 267 TTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCA 326 |||||||| | || |||||||||||||||| |||||||||||||||| ||| ||| Sbjct 4845 CTCACAAAGCCAAGCTGGAGTCAAGCTCAACAGTGTCTTCTTTCCCCGCTAATTTTTCCA 4786 Query 327 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 386 ||||||||||||||||||||||||||||||| ||||||||| |||| ||| ||||||||| Sbjct 4785 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAAAGTAGATAGAGACAATGGAAATCTCGTT 4726 Query 387 AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCA 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4725 AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCA 4666 Query 447 TAGTTACTCCCGC 459 ||||||||||||| Sbjct 4665 TAGTTACTCCCGC 4653 >seq47161 Length=705 Score = 109 bits (120), Expect = 2e-21 Identities = 96/120 (80%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| ||| || ||| ||||||| ||| |||| |||||||||||||||||||| Sbjct 283 CTTTTACTCGACGCGAGGTTTCTGTCCTCACTGAGCTAGCCTTAGGACACCTGCGTTATT 342 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||||||| |||||| || ||||||| | |||||||||||| || | |||||| Sbjct 343 GTTTGACAGATGTACCGCCCTAGTCAAACTCTCTGCCTGACAATGTCCTCGAATCGGATC 402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1633647328544